RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CISD1Q9NZ45 108 aaKnown RBP19.24■□□□□ 0.67
DDX39A-215ENST00000590696 CRLF1O75462 422 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 CPSF4O95639 269 aaKnown RBP19.23■□□□□ 0.67
DDX39A-215ENST00000590696 OR12D1P0DN82 309 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 GGT1P19440 569 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 COX5AP20674 150 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 TIMM23BQ5SRD1 257 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 OR8J2Q8NGG1 315 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 MIPOL1Q8TD10 442 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 SLC25A43Q8WUT9 341 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-215ENST00000590696 XAGE5Q8WWM1 108 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 TRIM44Q96DX7 344 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-215ENST00000590696 PKNOX2Q96KN3 472 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 ZIM3Q96PE6 472 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 TRAF4Q9BUZ4 470 aaPredicted RBP19.23■□□□□ 0.67
DDX39A-215ENST00000590696 DPY30Q9C005 99 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 ALG2Q9H553 416 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 AKTIPQ9H8T0 292 aa19.23■□□□□ 0.67
DDX39A-215ENST00000590696 SHISA9B4DS77 424 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 SCN2BO60939 215 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 NDUFS7O75251 213 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 PGM3O95394 542 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 AGR2O95994 175 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 CD8AP01732 235 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 IGHV4-39P01824 125 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 THBS1P07996 1170 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 TFPIP10646 304 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 PGM1P36871 562 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 APOBEC1P41238 236 aaKnown RBP19.22■□□□□ 0.67
DDX39A-215ENST00000590696 DMTNQ08495 405 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 ATAD3BQ5T9A4 648 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 ABLIM2Q6H8Q1 611 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 TYW3Q6IPR3 259 aaKnown RBP19.22■□□□□ 0.67
DDX39A-215ENST00000590696 TNFAIP8L2Q6P589 184 aaPredicted RBP19.22■□□□□ 0.67
DDX39A-215ENST00000590696 MTDHQ86UE4 582 aaKnown RBP19.22■□□□□ 0.67
DDX39A-215ENST00000590696 ANKRD46Q86W74 232 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 ZNF433Q8N7K0 673 aaPredicted RBP19.22■□□□□ 0.67
DDX39A-215ENST00000590696 ZNF781Q8N8C0 355 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 ZNF563Q8TA94 476 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 RAB8BQ92930 207 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 CTPS2Q9NRF8 586 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 NPAP1Q9NZP6 1156 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 WDR45Q9Y484 360 aa19.22■□□□□ 0.67
DDX39A-215ENST00000590696 PRSS51A0A1B0GVH4 220 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 WDR91A4D1P6 747 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 ABCD4O14678 606 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 KIAA0513O60268 411 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 BCAS1O75363 584 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-215ENST00000590696 IGHV3-9P01782 118 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 UQCRC2P22695 453 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 RYKP34925 604 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 PHC1P78364 1004 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 PDK3Q15120 406 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 SSX8Q7RTT4 187 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 P2RY8Q86VZ1 359 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 UBE2J2Q8N2K1 259 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 FAM71CQ8NEG0 241 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 DNAJA3Q96EY1 480 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 CCDC106Q9BWC9 280 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 EMC3Q9P0I2 261 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 GDF2Q9UK05 429 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-215ENST00000590696 SLC35A3Q9Y2D2 325 aa19.21■□□□□ 0.67
DDX39A-215ENST00000590696 NOSIPQ9Y314 301 aaKnown RBP19.21■□□□□ 0.67
DDX39A-215ENST00000590696 SPIN1Q9Y657 262 aaPredicted RBP19.21■□□□□ 0.67
DDX39A-215ENST00000590696 IGKV3D-15A0A087WSY6 115 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 OR5H1A6NKK0 313 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 GUSBP08236 651 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 CDH11P55287 796 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 ABCE1P61221 599 aaKnown RBP19.2■□□□□ 0.66
DDX39A-215ENST00000590696 FUT5Q11128 374 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 CHI3L2Q15782 390 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 ANXA8L1Q5VT79 327 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 FBXW9Q5XUX1 488 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 HMGN2P46Q86SG4 172 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 DTX2Q86UW9 622 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 VPS37AQ8NEZ2 397 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 OIT3Q8WWZ8 545 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 ROPN1LQ96C74 230 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 ZG16BQ96DA0 208 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 ZHX1-C8orf76Q96EF9 292 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 ARL5BQ96KC2 179 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 HS6ST2Q96MM7 605 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 GRIP2Q9C0E4 1043 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 SAP130Q9H0E3 1048 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 POLE3Q9NRF9 147 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 FAIMQ9NVQ4 179 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 CHRNA9Q9UGM1 479 aa19.2■□□□□ 0.66
DDX39A-215ENST00000590696 ANK3Q12955 4377 aaKnown RBP19.19■□□□□ 0.66
DDX39A-215ENST00000590696 ZNF716A6NP11 495 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 ANKRD28O15084 1053 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 ADAM11O75078 769 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 RAD51DO75771 328 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 PMS2P2O95744 297 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 TP53P04637 393 aaPredicted RBP19.19■□□□□ 0.66
DDX39A-215ENST00000590696 SERPINE1P05121 402 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 MYZAPP0CAP1 466 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 PTNP21246 168 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 AP1ARQ63HQ0 302 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 SAXO2Q658L1 398 aa19.19■□□□□ 0.66
DDX39A-215ENST00000590696 FRRS1Q6ZNA5 592 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms