RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 HNRNPCL3B7ZW38 293 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 DYNC1I1O14576 645 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 AP3D1O14617 1153 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 ANGPT2O15123 496 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 HNRNPCL1O60812 293 aaKnown RBP16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 SS18L1O75177 396 aaPredicted RBP16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 HNRNPCL4P0DMR1 293 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 EPXP11678 715 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 CD79BP40259 229 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 RNPS1Q15287 305 aaKnown RBP16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 GUSBP1Q15486 140 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 MAPK11Q15759 364 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 EXOC3L2Q2M3D2 409 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 ZNF836Q6ZNA1 936 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 FCRLAQ7L513 359 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 GRINAQ7Z429 371 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 VRK2Q86Y07 508 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 ZNF440Q8IYI8 595 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 ZNF610Q8N9Z0 462 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 POLDIP3Q9BY77 421 aaKnown RBP16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 ARMC7Q9H6L4 198 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 CTPS2Q9NRF8 586 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 ELOVL5Q9NYP7 299 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 SLC25A37Q9NYZ2 338 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 SLAMF8Q9P0V8 285 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 KLHL14Q9P2G3 628 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 ZNF443Q9Y2A4 671 aaPredicted RBP16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 NDUFAF1Q9Y375 327 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 MPDZO75970 2070 aa16.42■□□□□ 0.22
LDLRAD4-215ENST00000590371 TACC2O95359 2948 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 IGHV3-15A0A0B4J1V0 119 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 SH3D21A4FU49 640 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CFAP73A6NFT4 308 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 A6NNC1 897 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 EVPLLA8MZ36 301 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CASKO14936 926 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CGAP01215 116 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 NUDT7P0C024 238 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 HOXB9P17482 250 aaPredicted RBP16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CCNA2P20248 432 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 ENPP1P22413 925 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 HTR3AP46098 478 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 RAC3P60763 192 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CSNK2A1P68400 391 aaPredicted RBP16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 PLAURQ03405 335 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 FAM27E3Q08E93 113 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 SYT14P1Q58G82 188 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 TMEM201Q5SNT2 666 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 GCNT6Q5T4J0 391 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 PRAMEF8Q5VWM4 474 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 PRAMEF7Q5VXH5 474 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 ZNF474Q6S9Z5 364 aaPredicted RBP16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CDH24Q86UP0 819 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 STK32CQ86UX6 486 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 DPP10Q8N608 796 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 BBS10Q8TAM1 723 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 RNF128Q8TEB7 428 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 ABHD3Q8WU67 409 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 MAL2Q969L2 176 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 ZNF317Q96PQ6 595 aaPredicted RBP16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CCDC106Q9BWC9 280 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 C12orf49Q9H741 205 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 A4GALTQ9NPC4 353 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 VAPAQ9P0L0 249 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 CHRNA9Q9UGM1 479 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 IFT52Q9Y366 437 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 DSPPQ9NZW4 1301 aa16.41■□□□□ 0.22
LDLRAD4-215ENST00000590371 ENO4A6NNW6 628 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 SULT2B1O00204 365 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 PRKD3O94806 890 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 BMP2P12643 396 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 AGTR1P30556 359 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 ADSLP30566 484 aaPredicted RBP16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 SF3A3Q12874 501 aaKnown RBP eCLIP16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 EPS8Q12929 822 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 ZSWIM7Q19AV6 140 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 CGB2Q6NT52 195 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 MSRB3Q8IXL7 192 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 SLC43A2Q8N370 569 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 DACH2Q96NX9 599 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 KLHL4Q9C0H6 718 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 CLEC4MQ9H2X3 399 aaPredicted RBP16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 FANCFQ9NPI8 374 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 PLSCR4Q9NRQ2 329 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 RLIMQ9NVW2 624 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 PRDM4Q9UKN5 801 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 ITGB1BP2Q9UKP3 347 aa16.4■□□□□ 0.22
LDLRAD4-215ENST00000590371 TRBV5-3A0A0A0MS03 114 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 TMED7-TICAM2A0A0A6YYA0 188 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 CDHR4A6H8M9 788 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 ADAM11O75078 769 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 CTAG2O75638 210 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 THBS1P07996 1170 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 GKN3PP0CG01 181 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 CD1EP15812 388 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 FKBP2P26885 142 aaKnown RBP16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 DIO1P49895 249 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 POLR2HP52434 150 aaKnown RBP16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 COPZ1P61923 177 aa16.39■□□□□ 0.21
LDLRAD4-215ENST00000590371 DAZAP2Q15038 168 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms