RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 MTERF4Q7Z6M4 381 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 MTDHQ86UE4 582 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 CCDC103Q8IW40 242 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 TMEM186Q96B77 213 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 TMEM237Q96Q45 408 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 ZNF747Q9BV97 191 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 BTBD2Q9BX70 525 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 C1QTNF3Q9BXJ4 246 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 MRPL46Q9H2W6 279 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 SLC7A10Q9NS82 523 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 USP22Q9UPT9 525 aa12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 PRKDCP78527 4128 aaKnown RBP12.28□□□□□ -0.44
CSNK1D-224ENST00000584672 LOC105371242A0A075B767 164 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 hCG_2039718K7EN88 272 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 PDLIM1O00151 329 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 RAD51CO43502 376 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 AKAP10O43572 662 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 PRPS1P60891 318 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 CSNK2A1P68400 391 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 MERTKQ12866 999 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 SCGB2A2Q13296 93 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 LASP1Q14847 261 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 KLHL26Q53HC5 615 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 SLC25A53Q5H9E4 307 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 ZNF678Q5SXM1 525 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 TSPO2Q5TGU0 170 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 CARM1Q86X55 608 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 OR5W2Q8NH69 310 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 FBXO25Q8TCJ0 367 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 UBASH3BQ8TF42 649 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 FAHD2AQ96GK7 314 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 LRRC37BQ96QE4 947 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 SLC6A7Q99884 636 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 THUMPD3Q9BV44 507 aaKnown RBP12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 SAP130Q9H0E3 1048 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 TPK1Q9H3S4 243 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 PLK3Q9H4B4 646 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 SEC61A2Q9H9S3 476 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 ESM1Q9NQ30 184 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 GRIP1Q9Y3R0 1128 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 SPEF1Q9Y4P9 236 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 PCDHB14Q9Y5E9 798 aa12.27□□□□□ -0.45
CSNK1D-224ENST00000584672 GPR171O14626 319 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 WNT11O96014 354 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 UBL4AP11441 157 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 DDX5P17844 614 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 LCN1P31025 176 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 SLC1A3P43003 542 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 MAGEA12P43365 314 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 ARFIP2P53365 341 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 FOXA1P55317 472 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 TUBA1BP68363 451 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 TUBA4AP68366 448 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 IL1RL1Q01638 556 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 GUCY2DQ02846 1103 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 RIN1Q13671 783 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 PDK3Q15120 406 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 ADRM1Q16186 407 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 PDCD2Q16342 344 aaPredicted RBP12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 SYT14P1Q58G82 188 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 NOXRED1Q6NXP6 359 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 TUBA1AQ71U36 451 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 ZNF786Q8N393 782 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 C17orf78Q8N4C9 275 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 CLDND2Q8NHS1 167 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 CLHC1Q8NHS4 586 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 PIGXQ8TBF5 258 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 ZHX1-C8orf76Q96EF9 292 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 SLC38A2Q96QD8 506 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 DYNLRB1Q9NP97 96 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 SIRT5Q9NXA8 310 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 TREM2Q9NZC2 230 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 SH3BP4Q9P0V3 963 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 DCTN4Q9UJW0 460 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 KCNE3Q9Y6H6 103 aa12.26□□□□□ -0.45
CSNK1D-224ENST00000584672 ESPNB1AK53 854 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 ZNF264O43296 627 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 CRYAAP02489 173 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 HMGN2P05204 90 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 ERCC1P07992 297 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 IFI6P09912 130 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 LIMS1P48059 325 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 SESN3P58005 492 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 OR2B6P58173 313 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 CBFBQ13951 182 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 EFNB3Q15768 340 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 EXOSC6Q5RKV6 272 aaKnown RBP12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 DCST2Q5T1A1 773 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 HIST2H2BDQ6DRA6 164 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 ZDHHC24Q6UX98 284 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 C1orf229Q6ZS94 237 aaPredicted RBP12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 USP43Q70EL4 1123 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 SPATA21Q7Z572 469 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 TMEM151AQ8N4L1 468 aa12.25□□□□□ -0.45
CSNK1D-224ENST00000584672 C1orf162Q8NEQ5 155 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms