RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 C3AR1Q16581 482 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ENTPD8Q5MY95 495 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 WBP2NLQ6ICG8 309 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 AAGABQ6PD74 315 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 POMZP3Q6PJE2 187 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 GRINAQ7Z429 371 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 RANBP3LQ86VV4 465 aaPredicted RBP7.73□□□□□ -1.17
NUP88-211ENST00000575976 TSPYL5Q86VY4 417 aaPredicted RBP7.73□□□□□ -1.17
NUP88-211ENST00000575976 ADGRG3Q86Y34 549 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 LSMEM1Q8N8F7 131 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ATP6V1C2Q8NEY4 427 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 PHF10Q8WUB8 498 aaKnown RBP7.73□□□□□ -1.17
NUP88-211ENST00000575976 SMPDL3BQ92485 455 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 UTP4Q969X6 686 aaKnown RBP7.73□□□□□ -1.17
NUP88-211ENST00000575976 RELTQ969Z4 430 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 SARAFQ96BY9 339 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 WDYHV1Q96HA8 205 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ZNF559Q9BR84 538 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 TRIM2Q9C040 744 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 AMBRA1Q9C0C7 1298 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ADAM19Q9H013 955 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 TMEM27Q9HBJ8 222 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 OSGIN1Q9UJX0 560 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ACAD8Q9UKU7 415 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 SLC9A8Q9Y2E8 581 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 ZNF835Q9Y2P0 537 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 HEATR5AQ86XA9 2040 aa7.73□□□□□ -1.17
NUP88-211ENST00000575976 TMED7-TICAM2A0A0A6YYA0 188 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 TMEM72A0PK05 275 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 OR14I1A6ND48 311 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 CPSF4LA6NMK7 179 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 H0YC42 278 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 LINC01387J3KSC0 135 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 J3KTA2 159 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 BCKDKO14874 412 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 FMO6PO60774 539 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 SEMA7AO75326 666 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 STAMBPO95630 424 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 THY1P04216 161 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 SEMG1P04279 462 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 TPOP07202 933 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 PEPDP12955 493 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 CPN1P15169 458 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 ABOP16442 354 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 CCNA2P20248 432 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 POU3F2P20265 443 aaPredicted RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 GNLYP22749 145 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 ELK4P28324 431 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 SHC1P29353 583 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 APOBEC1P41238 236 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 HTR3AP46098 478 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 YAP1P46937 504 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 LHX2P50458 406 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 POLR2HP52434 150 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 SUCLG1P53597 346 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 TPD52P55327 224 aaPredicted RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 CLDN15P56746 228 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 CLDN18P56856 261 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 CLDN20P56880 219 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 RAC1P63000 192 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 SRYQ05066 204 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 RBPJQ06330 500 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 BCL2A1Q16548 175 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 ZSCAN26Q16670 478 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 GXYLT1Q4G148 440 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 MTX3Q5HYI7 312 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 EMC4Q5J8M3 183 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 WLSQ5T9L3 541 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 DEF8Q6ZN54 512 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 TSEN54Q7Z6J9 526 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 YTHDF3Q7Z739 585 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 ATG4DQ86TL0 474 aaPredicted RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 GALNT11Q8NCW6 608 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 OR5M9Q8NGP3 310 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 FAM57AQ8TBR7 257 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 ADAMTS16Q8TE57 1224 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 GEMIN6Q8WXD5 167 aaKnown RBP7.72□□□□□ -1.17
NUP88-211ENST00000575976 C3orf49Q96BT1 292 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 LRGUKQ96M69 825 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 TMEM185BQ9H7F4 350 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 SERINC1Q9NRX5 453 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 PNPLA3Q9NST1 481 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 ALKBH4Q9NXW9 302 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 RPS6KB2Q9UBS0 482 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 PRDM4Q9UKN5 801 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 CAMK2AQ9UQM7 478 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 TMED7Q9Y3B3 224 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 AP4B1Q9Y6B7 739 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 FLNCQ14315 2725 aa7.72□□□□□ -1.17
NUP88-211ENST00000575976 A0A0B4J2E0 115 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 A0A0J9YW62 118 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 A0A1B0GX12 115 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 TRAPPC13A5PLN9 417 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 AQP12BA6NM10 295 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 hCG_2039718K7EN88 272 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 PRRG2O14669 202 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SEC14L5O43304 696 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 SLC19A2O60779 497 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 LYPD3O95274 346 aa7.71□□□□□ -1.18
NUP88-211ENST00000575976 IFNW1P05000 195 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms