RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 CCT3P49368 545 aaKnown RBP16.71■□□□□ 0.27
SCARF1-204ENST00000570902 GZMKP49863 264 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 DIO1P49895 249 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 LSM11P83369 360 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCARF1-204ENST00000570902 CHRNEQ04844 493 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 CHRNB3Q05901 458 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 SPOCK1Q08629 439 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 PDK3Q15120 406 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 TIGD2Q4W5G0 525 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 TMPPEQ6ZT21 453 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 OR2T11Q8NH01 316 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 ST8SIA1Q92185 356 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 HTRA1Q92743 480 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 APH1AQ96BI3 265 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 INPP5KQ9BT40 448 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 OXSMQ9NWU1 459 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 ASB6Q9NWX5 421 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 KCNS2Q9ULS6 477 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 NOSIPQ9Y314 301 aaKnown RBP16.71■□□□□ 0.27
SCARF1-204ENST00000570902 PMF1-BGLAPU3KQ54 211 aa16.71■□□□□ 0.27
SCARF1-204ENST00000570902 SULT2B1O00204 365 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
SCARF1-204ENST00000570902 TP53BP2Q13625 1128 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 SPDYE7PQ495Y7 208 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 ABLIM2Q6H8Q1 611 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 OR7E24Q6IFN5 339 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 FAM166AQ6J272 317 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 MTDHQ86UE4 582 aaKnown RBP16.7■□□□□ 0.26
SCARF1-204ENST00000570902 RIBC1Q8N443 379 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-204ENST00000570902 PSMA8Q8TAA3 256 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 SLC25A43Q8WUT9 341 aaPredicted RBP16.7■□□□□ 0.26
SCARF1-204ENST00000570902 TMEM234Q8WY98 164 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 OR5P2Q8WZ92 322 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 ZNF524Q96C55 264 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 ZHX1-C8orf76Q96EF9 292 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 GPATCH2Q9NW75 528 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 TAS2R16Q9NYV7 291 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 ATP6V1HQ9UI12 483 aa16.7■□□□□ 0.26
SCARF1-204ENST00000570902 TMEM114B3SHH9 223 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 M0R1B8 84 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 SCAMP2O15127 329 aaKnown RBP16.69■□□□□ 0.26
SCARF1-204ENST00000570902 IGHV3-9P01782 118 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 LINC00032P0C843 101 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 BCKDHAP12694 445 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 HNF1AP20823 631 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 SYT14P1Q58G82 188 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 LIPMQ5VYY2 423 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 B3GLCTQ6Y288 498 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 NATD1Q8N6N6 113 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 ARIH2OSQ8N7S6 290 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 MOAP1Q96BY2 351 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 THUMPD3Q9BV44 507 aaKnown RBP16.69■□□□□ 0.26
SCARF1-204ENST00000570902 NMUR2Q9GZQ4 415 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 LAT2Q9GZY6 243 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 QRSL1Q9H0R6 528 aaKnown RBP16.69■□□□□ 0.26
SCARF1-204ENST00000570902 TUBB1Q9H4B7 451 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 FKRPQ9H9S5 495 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 ATAD3AQ9NVI7 634 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 RAB21Q9UL25 225 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 FIS1Q9Y3D6 152 aa16.69■□□□□ 0.26
SCARF1-204ENST00000570902 SPIN1Q9Y657 262 aaPredicted RBP16.69■□□□□ 0.26
SCARF1-204ENST00000570902 YLPM1P49750 1951 aaKnown RBP16.69■□□□□ 0.26
SCARF1-204ENST00000570902 ALPK2Q86TB3 2170 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 SERINC4A6NH21 518 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 GPR171O14626 319 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 DNAJA2O60884 412 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 IGFBP5P24593 272 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 MAPK1P28482 360 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 SESN3P58005 492 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 MERTKQ12866 999 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 SKP2Q13309 424 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 LSM12Q3MHD2 195 aaKnown RBP16.68■□□□□ 0.26
SCARF1-204ENST00000570902 PDZK1Q5T2W1 519 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 C10orf107Q8IVU9 208 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 MREGQ8N565 214 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 OR7A2PQ8NGA2 310 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 SFXN5Q8TD22 340 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 APOPT1Q96IL0 206 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 MUS81Q96NY9 551 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 TRMOQ9BU70 441 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 MALT1Q9UDY8 824 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 ATP23Q9Y6H3 246 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 KCNE3Q9Y6H6 103 aa16.68■□□□□ 0.26
SCARF1-204ENST00000570902 PLCE1Q9P212 2302 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 A0A1W2PR80 420 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 NDUFS8O00217 210 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 SPAG7O75391 227 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 MRPL33O75394 65 aaKnown RBP16.67■□□□□ 0.26
SCARF1-204ENST00000570902 CYP7B1O75881 506 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 LAMP1P11279 417 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 PGCP20142 388 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 APOBEC3AP31941 199 aaPredicted RBP16.67■□□□□ 0.26
SCARF1-204ENST00000570902 GABRA6Q16445 453 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 FAM120AOSQ5T036 256 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 C1QTNF12Q5T7M4 302 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 KANK2Q63ZY3 851 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 BHLHB9Q6PI77 547 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 DDIASQ8IXT1 998 aa16.67■□□□□ 0.26
SCARF1-204ENST00000570902 PIGXQ8TBF5 258 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms