RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 A4GNTQ9UNA3 340 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 NTNG1Q9Y2I2 539 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 TMED7Q9Y3B3 224 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 RRP15Q9Y3B9 282 aaKnown RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 SAMHD1Q9Y3Z3 626 aaKnown RBP7.06□□□□□ -1.28
CDH1-208ENST00000565810 TESMINQ9Y4I5 508 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 MED13Q9UHV7 2174 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 PTPRQQ9UMZ3 2332 aa7.06□□□□□ -1.28
CDH1-208ENST00000565810 MGAQ8IWI9 3026 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 CHD8Q9HCK8 2581 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 A0A087WUJ7 227 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 TRGV5A0A0B4J1U4 118 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 A0A1W2PRQ8 180 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 OR2M5A3KFT3 312 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 C7orf72A4D263 438 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 TTLL8A6PVC2 850 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 B4DXG7 233 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 NPIPA5E9PKD4 350 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ETV2O00321 342 aaPredicted RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 CLOCKO15516 846 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 SUSD5O60279 629 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 HCN1O60741 890 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 TIPRLO75663 272 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 PEPDP12955 493 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 CCNA2P20248 432 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 CHMP24386 653 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ELK4P28324 431 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 IFNGR2P38484 337 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 SELENBP1Q13228 472 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 DGCR6Q14129 220 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ATP6AP1Q15904 470 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 KRTCAP3Q53RY4 240 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 FGD3Q5JSP0 725 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 WIPI1Q5MNZ9 446 aaPredicted RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 PDSS1Q5T2R2 415 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 C3orf33Q6P1S2 294 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 TTC33Q6PID6 262 aaPredicted RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 C5orf46Q6UWT4 87 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ZNF730Q6ZMV8 503 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ZNF605Q86T29 641 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ATG4DQ86TL0 474 aaPredicted RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 RNF113BQ8IZP6 322 aaKnown RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 LINC00471Q8N535 108 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 CISD2Q8N5K1 135 aaKnown RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 LSM14AQ8ND56 463 aaKnown RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 OR5M1Q8NGP8 315 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 OR52J3Q8NH60 311 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 SLC25A43Q8WUT9 341 aaPredicted RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 LRTOMTQ8WZ04 291 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ABTB1Q969K4 478 aaPredicted RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 SDCCAG3Q96C92 435 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 DDIT4LQ96D03 193 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ALPK1Q96QP1 1244 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 TAAR6Q96RI8 345 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 EPYCQ99645 322 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ANKRD19PQ9H560 264 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 DCLRE1BQ9H816 532 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ZDHHC11Q9H8X9 412 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 RHCGQ9UBD6 479 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 CHRNA9Q9UGM1 479 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 ACAD8Q9UKU7 415 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 SLC7A7Q9UM01 511 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 NPIPA1Q9UND3 350 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 HRH3Q9Y5N1 445 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 AP4B1Q9Y6B7 739 aa7.05□□□□□ -1.28
CDH1-208ENST00000565810 TPRP12270 2363 aaKnown RBP7.05□□□□□ -1.28
CDH1-208ENST00000565810 ANKRD11Q6UB99 2663 aaPredicted RBP7.04□□□□□ -1.28
CDH1-208ENST00000565810 ACACBO00763 2458 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 HTR3EA5X5Y0 456 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 A8MVM7 634 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 SHISA8B8ZZ34 492 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 H0Y3Z8 333 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 H3BML4 177 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 H3BNX3 289 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 FFAR1O14842 300 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 ZNF208O43345 1280 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 SEMA7AO75326 666 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 PRSS23O95084 383 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 NTN1O95631 604 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 ACTL6AO96019 429 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 IGHG3P01860 377 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 TFPIP10646 304 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 POU3F2P20265 443 aaPredicted RBP7.04□□□□□ -1.28
CDH1-208ENST00000565810 MST1P26927 711 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 DNAJA1P31689 397 aaKnown RBP7.04□□□□□ -1.28
CDH1-208ENST00000565810 RBM34P42696 430 aaKnown RBP7.04□□□□□ -1.28
CDH1-208ENST00000565810 CLK1P49759 484 aaKnown RBP7.04□□□□□ -1.28
CDH1-208ENST00000565810 HMGA2P52926 109 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 RAC1P63000 192 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 NFATC3Q12968 1075 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 RCN1Q15293 331 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 IQCCQ4KMZ1 466 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 RNFT1Q5M7Z0 435 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 ARHGAP11AQ6P4F7 1023 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 TRILQ7L0X0 811 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 TSEN54Q7Z6J9 526 aaKnown RBP7.04□□□□□ -1.28
CDH1-208ENST00000565810 AMIGO2Q86SJ2 522 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 ADGRG3Q86Y34 549 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 NKAIN4Q8IVV8 208 aa7.04□□□□□ -1.28
CDH1-208ENST00000565810 CDK20Q8IZL9 346 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms