RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 IGKV1D-42A0A075B6H8 117 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 TERTO14746 1132 aaKnown RBP16.46■□□□□ 0.23
COMMD4-208ENST00000563220 PRKYO43930 277 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 MAN1A2O60476 641 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 FBXO45P0C2W1 286 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 ENDOUP21128 410 aaKnown RBP16.46■□□□□ 0.23
COMMD4-208ENST00000563220 SLC1A3P43003 542 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 CSNK2BP67870 215 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 DNASE1L3Q13609 305 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 BICRALQ6AI39 1079 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 ERI1Q8IV48 349 aaKnown RBP16.46■□□□□ 0.23
COMMD4-208ENST00000563220 CLDN22Q8N7P3 220 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 OR4Q3Q8NH05 313 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 SLC22A8Q8TCC7 542 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 TRUB1Q8WWH5 349 aaKnown RBP16.46■□□□□ 0.23
COMMD4-208ENST00000563220 TTC9Q92623 222 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 GGHQ92820 318 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 OSTF1Q92882 214 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 ADAM19Q9H013 955 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 ENKD1Q9H0I2 346 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 GALNT9Q9HCQ5 603 aa16.46■□□□□ 0.23
COMMD4-208ENST00000563220 EFCAB9A8MZ26 197 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 B4DXG7 233 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 PTP4A3O75365 173 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 ITGA10O75578 1167 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 TRMUO75648 421 aaKnown RBP16.46■□□□□ 0.22
COMMD4-208ENST00000563220 WISP1O95388 367 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 PCYT1AP49585 367 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 P2RX1P51575 399 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 GAS1P54826 345 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 ZBED5Q49AG3 693 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 FCRLBQ6BAA4 426 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 OR5M10Q6IEU7 315 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 SLC30A6Q6NXT4 461 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 BCDIN3DQ7Z5W3 292 aaKnown RBP16.46■□□□□ 0.22
COMMD4-208ENST00000563220 OR10G3Q8NGC4 313 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 OR8J1Q8NGP2 316 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 OR13C2Q8NGS9 318 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 FGF11Q92914 225 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 POLDIP3Q9BY77 421 aaKnown RBP16.46■□□□□ 0.22
COMMD4-208ENST00000563220 OR52D1Q9H346 318 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 TBC1D23Q9NUY8 699 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 PSORS1C1Q9UIG5 152 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 SIGLEC7Q9Y286 467 aa16.46■□□□□ 0.22
COMMD4-208ENST00000563220 MUC6Q6W4X9 2439 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 TLX2O43763 284 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-208ENST00000563220 ENTPD6O75354 484 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 SAGP10523 405 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-208ENST00000563220 TACR3P29371 465 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 TTKP33981 857 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 DLSTP36957 453 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 SOX3P41225 446 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 PMS2P3Q13401 168 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 NTRK2Q16620 822 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 XAF1Q6GPH4 301 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 AHSA2Q719I0 299 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 SLC15A4Q8N697 577 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 B4GALNT2Q8NHY0 566 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 BRIX1Q8TDN6 353 aaKnown RBP16.45■□□□□ 0.22
COMMD4-208ENST00000563220 GPR119Q8TDV5 335 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 CCDC90BQ9GZT6 254 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 CLN6Q9NWW5 311 aa16.45■□□□□ 0.22
COMMD4-208ENST00000563220 TRAV27A0A087WT01 109 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 LOC101059948A0A1B0GTJ6 334 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 ELOA3DA6NLF2 546 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-208ENST00000563220 LRRN3E7EW58 273 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 RAD1O60671 282 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 PNMTP11086 282 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 PTGDSP41222 190 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 TMED10P49755 219 aaKnown RBP16.44■□□□□ 0.22
COMMD4-208ENST00000563220 Q0VFX4 171 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 FHL1Q13642 323 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 NEDD8Q15843 81 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 SNAPC1Q16533 368 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 ZNF791Q3KP31 576 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-208ENST00000563220 ELOA3BQ3SY89 546 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 MISPQ8IVT2 679 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 ELOA3Q8NG57 546 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 OR51A7Q8NH64 312 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 IPCEF1Q8WWN9 437 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-208ENST00000563220 SPACA9Q96E40 222 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-208ENST00000563220 TNFRSF13CQ96RJ3 184 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 CCNL2Q96S94 520 aaPredicted RBP16.44■□□□□ 0.22
COMMD4-208ENST00000563220 UBQLN3Q9H347 655 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 CDCP1Q9H5V8 836 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 FKBP14Q9NWM8 211 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 DNAJC27Q9NZQ0 273 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 SH3D21A4FU49 640 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 CLCA1A8K7I4 914 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 NUDT14O95848 222 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 CH25HO95992 272 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 MT-ND2P03891 347 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 PGCP20142 388 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 PCMT1P22061 227 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 LIMK1P53667 647 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 EGR4Q05215 589 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 IL10RAQ13651 578 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 CBFBQ13951 182 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 COL28A1Q2UY09 1125 aa16.44■□□□□ 0.22
COMMD4-208ENST00000563220 TMEM201Q5SNT2 666 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms