RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 COQ8BQ96D53 544 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 DNAJA3Q96EY1 480 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 RADILQ96JH8 1075 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 SLC35G5Q96KT7 338 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 CACNG6Q9BXT2 260 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 NMUR2Q9GZQ4 415 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 LAT2Q9GZY6 243 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 MKLN1Q9UL63 735 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 B3GALT5Q9Y2C3 310 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 NOSIPQ9Y314 301 aaKnown RBP11.47□□□□□ -0.57
SF3B3-202ENST00000562722 PRR14LQ5THK1 2151 aa11.47□□□□□ -0.57
SF3B3-202ENST00000562722 IGHV4-30-2A0A087WSY4 118 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 RNF103-CHMP3A0A140T963 221 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 A0A1W2PR80 420 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 FAM234BA2RU67 622 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 SPAG7O75391 227 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 AK1P00568 194 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 CASP9P55211 416 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 FBXW9Q5XUX1 488 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 TMPPEQ6ZT21 453 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 OLIG3Q7RTU3 272 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 C6orf120Q7Z4R8 191 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 FBXL14Q8N1E6 418 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 DEPDC4Q8N2C3 294 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF433Q8N7K0 673 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-202ENST00000562722 OR4A15Q8NGL6 344 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 SLC25A43Q8WUT9 341 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-202ENST00000562722 TMEM158Q8WZ71 300 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 ZNF75CPQ92670 426 aaPredicted RBP11.46□□□□□ -0.57
SF3B3-202ENST00000562722 HTRA1Q92743 480 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 C3orf30Q96M34 536 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 EXD2Q9NVH0 621 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 SLC17A7Q9P2U7 560 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 MGAT4BQ9UQ53 548 aa11.46□□□□□ -0.57
SF3B3-202ENST00000562722 SONP18583 2426 aaKnown RBP11.46□□□□□ -0.58
SF3B3-202ENST00000562722 CENPVL1A0A0U1RR11 272 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 ESPNB1AK53 854 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 M0R1B8 84 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 ETV2O00321 342 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-202ENST00000562722 GPRIN2O60269 458 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 FCMRO60667 390 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 UGT2B17O75795 530 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 DHRS4L1P0CG22 281 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 G6PDP11413 515 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 CCNA2P20248 432 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 PTAFRP25105 342 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 RYKP34925 604 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 FABP6P51161 128 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 IRX1P78414 480 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-202ENST00000562722 SPOCK1Q08629 439 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 RAB35Q15286 201 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 ZNF141Q15928 474 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 ATAD3BQ5T9A4 648 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 ABLIM2Q6H8Q1 611 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 DNM1P46Q6ZS02 220 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 MTDHQ86UE4 582 aaKnown RBP11.45□□□□□ -0.58
SF3B3-202ENST00000562722 CLECL1Q8IZS7 167 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 MUC15Q8N387 334 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 DHRS9Q9BPW9 319 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 GRIP2Q9C0E4 1043 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 SERHL2Q9H4I8 314 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 CTPS2Q9NRF8 586 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 CBLN4Q9NTU7 201 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 ACER3Q9NUN7 267 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 ASB6Q9NWX5 421 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 MKS1Q9NXB0 559 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 CHRNA9Q9UGM1 479 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 KCNE5Q9UJ90 142 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 PCDHGB4Q9UN71 923 aa11.45□□□□□ -0.58
SF3B3-202ENST00000562722 RTTNQ86VV8 2226 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 COL6A5A8TX70 2615 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 E7EQL1 145 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 GPR171O14626 319 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 MRPL33O75394 65 aaKnown RBP11.44□□□□□ -0.58
SF3B3-202ENST00000562722 PGM3O95394 542 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 THBS1P07996 1170 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 OR12D1P0DN82 309 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 TTKP33981 857 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 SERPINB5P36952 375 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 APOBEC1P41238 236 aaKnown RBP11.44□□□□□ -0.58
SF3B3-202ENST00000562722 OR2B6P58173 313 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 DSCR9P59020 149 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 HPCAP84074 193 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 MAD2L1Q13257 205 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-202ENST00000562722 TMEM249Q2WGJ8 235 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 ARHGAP11BQ3KRB8 267 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 C6orf52Q5T4I8 152 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 OR4F3Q6IEY1 312 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 PHC2Q8IXK0 858 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 RIMKLAQ8IXN7 391 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 EIF1ADQ8N9N8 165 aaKnown RBP11.44□□□□□ -0.58
SF3B3-202ENST00000562722 PIGXQ8TBF5 258 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 TCP10LQ8TDR4 215 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 PPP1R36Q96LQ0 422 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 C1QTNF6Q9BXI9 259 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 ZNF350Q9GZX5 532 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 OR51I1Q9H343 314 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 MANSC1Q9H8J5 431 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 TAS2R16Q9NYV7 291 aa11.44□□□□□ -0.58
SF3B3-202ENST00000562722 NOP53Q9NZM5 478 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms