RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 FASP25445 335 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 LCN1P31025 176 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 CLDN15P56746 228 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 FAM27E3Q08E93 113 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 PON3Q15166 354 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 FXNQ16595 210 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 CYP51A1Q16850 503 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 FAM98BQ52LJ0 330 aaKnown RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 OGFRL1Q5TC84 451 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 GLYATQ6IB77 296 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF474Q6S9Z5 364 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 PRSS57Q6UWY2 283 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 C20orf204Q6ZNR8 217 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 FKBP9P1Q75LS8 142 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 BTLAQ7Z6A9 289 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 P3H2Q8IVL5 708 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 FNDC9Q8TBE3 224 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 NRG4Q8WWG1 115 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 HOXB13Q92826 284 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 EME1Q96AY2 570 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 WFIKKN1Q96NZ8 548 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 CPPED1Q9BRF8 314 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 PAIP1Q9H074 479 aaKnown RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 OPN3Q9H1Y3 402 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-214ENST00000560402 FANCFQ9NPI8 374 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 KLHL28Q9NXS3 571 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 VAPAQ9P0L0 249 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 SH3BP4Q9P0V3 963 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 PROCRQ9UNN8 238 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF337Q9Y3M9 751 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 ARID1AO14497 2285 aa12.19□□□□□ -0.46
SMAD3-214ENST00000560402 DSCAMO60469 2012 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 A0A087WZY1 265 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 ALG1L2C9J202 215 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 TBX19O60806 448 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 UTS2O95399 124 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 ANGPTL1O95841 491 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 CGAP01215 116 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 ZCCHC18P0CG32 403 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 PPP3CBP16298 524 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 GGT1P19440 569 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 KCNJ5P48544 419 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 SUCLG1P53597 346 aaKnown RBP12.18□□□□□ -0.46
SMAD3-214ENST00000560402 LTBQ06643 244 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 PRSS53Q2L4Q9 553 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 TMEM44Q2T9K0 475 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 Q5PR19 223 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 FAM214BQ7L5A3 538 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 SERPINA11Q86U17 422 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 MICU2Q8IYU8 434 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 CDRT4Q8N9R6 151 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 OR7A2PQ8NGA2 310 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 OR6K3Q8NGY3 331 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 COQ8BQ96D53 544 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 PIK3IP1Q96FE7 263 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 REXO5Q96IC2 774 aaKnown RBP12.18□□□□□ -0.46
SMAD3-214ENST00000560402 CCL19Q99731 98 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 GORASP2Q9H8Y8 452 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 FLRT3Q9NZU0 649 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 RIMS3Q9UJD0 308 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 EMC9Q9Y3B6 208 aa12.18□□□□□ -0.46
SMAD3-214ENST00000560402 TRBV5-3A0A0A0MS03 114 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 C7orf72A4D263 438 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 H0YC42 278 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 H0YJX3 145 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 SIAH2O43255 324 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 TMCC2O75069 709 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 NKX2-2O95096 273 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 CPSF4O95639 269 aaKnown RBP12.17□□□□□ -0.46
SMAD3-214ENST00000560402 HEXAP06865 529 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 PEX2P28328 305 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 GABRA3P34903 492 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 GPC1P35052 558 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 MAP3K8P41279 467 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 RFX3P48380 749 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 TPD52P55327 224 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-214ENST00000560402 CLDN20P56880 219 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 CHRNB3Q05901 458 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 HSPB3Q12988 150 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 ACKR1Q16570 336 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 SGCBQ16585 318 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMAD3-214ENST00000560402 ZNF621Q6ZSS3 439 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 MARCH3Q86UD3 253 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 GGNQ86UU5 652 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 ANKRD46Q86W74 232 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 MISPQ8IVT2 679 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 OR52E4Q8NGH9 312 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 OR4A15Q8NGL6 344 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 OR10A6Q8NH74 314 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 DUSP19Q8WTR2 217 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 ZBTB8AQ96BR9 441 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 ZBED6CLQ96FA7 236 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-214ENST00000560402 GMPPAQ96IJ6 420 aaPredicted RBP12.17□□□□□ -0.46
SMAD3-214ENST00000560402 COX4I2Q96KJ9 171 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 EGLN2Q96KS0 407 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 MS4A4EQ96PG1 132 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 RTN4RQ9BZR6 473 aa12.17□□□□□ -0.46
SMAD3-214ENST00000560402 GLRX2Q9NS18 164 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms