RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 KLHL26Q53HC5 615 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 ZCCHC12Q6PEW1 402 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 ZDHHC24Q6UX98 284 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 TMPPEQ6ZT21 453 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 MTDHQ86UE4 582 aaKnown RBP12.16□□□□□ -0.46
ACTN1-219ENST00000556432 C17orf78Q8N4C9 275 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 PIGXQ8TBF5 258 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 PAFAH2Q99487 392 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 MID1IP1Q9NPA3 183 aa12.16□□□□□ -0.46
ACTN1-219ENST00000556432 B9A039 149 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 FAM157AC9JC47 383 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 ZNF264O43296 627 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 SEC22BO75396 215 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 OR4A8P0C604 315 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 CDH2P19022 906 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-219ENST00000556432 IMPDH1P20839 514 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 CDH15P55291 814 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 FOXA1P55317 472 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 PRPS1P60891 318 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 PDK3Q15120 406 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 ZNF385BQ569K4 471 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 SYT14P1Q58G82 188 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 SLC25A53Q5H9E4 307 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 DCST2Q5T1A1 773 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
ACTN1-219ENST00000556432 GLCCI1Q86VQ1 547 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 TMEM151AQ8N4L1 468 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 CCNYL1Q8N7R7 359 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 SPATA4Q8NEY3 305 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 ZNF524Q96C55 264 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 STACQ99469 402 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 KCNF1Q9H3M0 494 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 RRAGDQ9NQL2 400 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-219ENST00000556432 DUSP22Q9NRW4 184 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 CA10Q9NS85 328 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 ZCCHC3Q9NUD5 404 aaKnown RBP12.15□□□□□ -0.46
ACTN1-219ENST00000556432 NINJ2Q9NZG7 142 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 PCDHB14Q9Y5E9 798 aa12.15□□□□□ -0.46
ACTN1-219ENST00000556432 PKD1L1Q8TDX9 2849 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 SERTM1A2A2V5 107 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 ZNF716A6NP11 495 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 POC1B-GALNT4F8VUJ3 575 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 TRIM77I1YAP6 450 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 KLF11O14901 512 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 LILRA1O75019 489 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 RSL1D1O76021 490 aaKnown RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 HMGN2P05204 90 aaKnown RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 GSTA1P08263 222 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 TACSTD2P09758 323 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 IFNGR1P15260 489 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 ATP5F1P24539 256 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 SLC1A3P43003 542 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 IDH3GP51553 393 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 ATP12AP54707 1039 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 DVL1P1P54792 670 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 SESN3P58005 492 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 ZSWIM7Q19AV6 140 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 THSD4Q6ZMP0 1018 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 PEG10Q86TG7 708 aaKnown RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 SLC22A9Q8IVM8 553 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 C1orf162Q8NEQ5 155 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 CLHC1Q8NHS4 586 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 SLC25A43Q8WUT9 341 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 FAM120BQ96EK7 910 aaKnown RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 THUMPD3Q9BV44 507 aaKnown RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 PIGUQ9H490 435 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 REEP4Q9H6H4 257 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 DCTN4Q9UJW0 460 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 FAF1Q9UNN5 650 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 DTNAQ9Y4J8 743 aa12.14□□□□□ -0.47
ACTN1-219ENST00000556432 SPIN1Q9Y657 262 aaPredicted RBP12.14□□□□□ -0.47
ACTN1-219ENST00000556432 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 EIF4E2O60573 245 aaKnown RBP12.13□□□□□ -0.47
ACTN1-219ENST00000556432 SKAP2O75563 359 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-219ENST00000556432 CRYAAP02489 173 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 DDX5P17844 614 aaKnown RBP12.13□□□□□ -0.47
ACTN1-219ENST00000556432 PGCP20142 388 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 GIFP27352 417 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 NTF4P34130 210 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 MAGEA8P43361 318 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 PPOXP50336 477 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 PRKAA2P54646 552 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 DEFA6Q01524 100 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 TP53BP2Q13625 1128 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 TRIP10Q15642 601 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 ADIPOQQ15848 244 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 SPDYE7PQ495Y7 208 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 CCDC103Q8IW40 242 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 ADAMTS15Q8TE58 950 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 FAM216AQ8WUB2 273 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 TMEM234Q8WY98 164 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 ST8SIA1Q92185 356 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 TSSK3Q96PN8 268 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 RBM4Q9BWF3 364 aaKnown RBP12.13□□□□□ -0.47
ACTN1-219ENST00000556432 LPAR2Q9HBW0 351 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 SLC7A10Q9NS82 523 aa12.13□□□□□ -0.47
ACTN1-219ENST00000556432 ACSS1Q9NUB1 689 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-219ENST00000556432 TMEM216Q9P0N5 145 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms