RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 FBXO34Q9NWN3 711 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 STX18Q9P2W9 335 aaKnown RBP8.72□□□□□ -1.01
ACTN1-215ENST00000555616 Q9UFV3 132 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 FBXL2Q9UKC9 423 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 ZNF443Q9Y2A4 671 aaPredicted RBP8.72□□□□□ -1.01
ACTN1-215ENST00000555616 SLC9A8Q9Y2E8 581 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 SLC6A5Q9Y345 797 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 PCNX1Q96RV3 2341 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 TACC2O95359 2948 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 NCKAP5O14513 1909 aa8.72□□□□□ -1.01
ACTN1-215ENST00000555616 CACNA1CQ13936 2221 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 NPIPA5A0A0B4J1W7 369 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 NKX2-6A6NCS4 301 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 SERINC4A6NH21 518 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 C17orf51A8MQB3 221 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 NPIPA7E9PJI5 369 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 NPIPB9F8W1W9 429 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 SCO2O43819 266 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 OXSR1O95747 527 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-215ENST00000555616 EPPINO95925 133 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 FESP07332 822 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 NPIPA8P0DM63 369 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 RAP2AP10114 183 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 FCGR1AP12314 374 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 CPN1P15169 458 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 ITGA2P17301 1181 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 CD247P20963 164 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 MSX1P28360 303 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 GCKP35557 465 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 TOMM20Q15388 145 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 SF3B4Q15427 424 aaKnown RBP eCLIP8.71□□□□□ -1.021e-25■■■■■ 49.5
ACTN1-215ENST00000555616 SLC25A35Q3KQZ1 300 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 GRAMD1BQ3KR37 738 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 PDZK1Q5T2W1 519 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 RNF220Q5VTB9 566 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 NSUN5P2Q63ZY6 315 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 VRK2Q86Y07 508 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 ADGRG5Q8IZF4 528 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 FAM86B1Q8N7N1 296 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 FADS6Q8N9I5 356 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 OR4C3Q8NH37 302 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 OR14L1PQ8NHC6 308 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 CANT1Q8WVQ1 401 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 PYDC1Q8WXC3 89 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 ABTB1Q969K4 478 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-215ENST00000555616 ZG16BQ96DA0 208 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 DUS3LQ96G46 650 aaKnown RBP8.71□□□□□ -1.02
ACTN1-215ENST00000555616 WDYHV1Q96HA8 205 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 KCNJ16Q9NPI9 418 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 CCM2LQ9NUG4 571 aaPredicted RBP8.71□□□□□ -1.02
ACTN1-215ENST00000555616 ALKBH4Q9NXW9 302 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 TAS2R10Q9NYW0 307 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 FLRT3Q9NZU0 649 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 STOML1Q9UBI4 398 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 SLC35A3Q9Y2D2 325 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 SH3GLB1Q9Y371 365 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 MRPS18CQ9Y3D5 142 aaKnown RBP8.71□□□□□ -1.02
ACTN1-215ENST00000555616 DTNAQ9Y4J8 743 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 AP4S1Q9Y587 144 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 OTOGQ6ZRI0 2925 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 EML6Q6ZMW3 1958 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 GTF3C1Q12789 2109 aa8.71□□□□□ -1.02
ACTN1-215ENST00000555616 DNAJC13O75165 2243 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 ANKHD1Q8IWZ3 2542 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 IGLV3-32A0A0A0MS00 114 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 A0A1W2PQD3 144 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MBD3L4A6NDZ8 208 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MBD3L3A6NE82 208 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MBD3L5A6NJ08 208 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 CD8B2A6NJW9 211 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 HSPB2A8KAH6 182 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 KDM4EB2RXH2 506 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 ALG1L2C9J202 215 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 H0Y3Z8 333 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 GTPBP1O00178 669 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 IFNW1P05000 195 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 FABP3P05413 133 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 UBL4AP11441 157 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 DPP4P27487 766 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 CEACAM8P31997 349 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 TIMP3P35625 211 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 DSCR4P56555 118 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 RGS8P57771 180 aaPredicted RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 EEF1A1P68104 462 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 KCNJ10P78508 379 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 SLC34A1Q06495 639 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 FGFBP1Q14512 234 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 GANABQ14697 944 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 HSPB2Q16082 182 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MAPK14Q16539 360 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 DUSP7Q16829 419 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 KLHL26Q53HC5 615 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MRPL2Q5T653 305 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MEX3BQ6ZN04 569 aaKnown RBP8.7□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF836Q6ZNA1 936 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 VTCN1Q7Z7D3 282 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 HMGN2P46Q86SG4 172 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 LIX1LQ8IVB5 337 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 MISPQ8IVT2 679 aa8.7□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF440Q8IYI8 595 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms