RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CACNA1AO00555 2505 aa4.29□□□□□ -1.72
PCNX1-205ENST00000553508 GVINP1Q7Z2Y8 2422 aa4.29□□□□□ -1.72
PCNX1-205ENST00000553508 ADGRA3Q8IWK6 1321 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 ZNF292O60281 2723 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 FAM170AA1A519 330 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 TMEM89A2RUT3 159 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 BUB1O43683 1085 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 STK17BO94768 372 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 GOSR1O95249 250 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 IGFBP1P08833 259 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-205ENST00000553508 FUT3P21217 361 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 MRPS6P82932 125 aaKnown RBP4.28□□□□□ -1.72
PCNX1-205ENST00000553508 SP4Q02446 784 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 TSTA3Q13630 321 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-205ENST00000553508 KHDRBS2Q5VWX1 349 aaKnown RBP4.28□□□□□ -1.72
PCNX1-205ENST00000553508 LEMD2Q8NC56 503 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 ZNF397Q8NF99 534 aaPredicted RBP4.28□□□□□ -1.72
PCNX1-205ENST00000553508 SPATA13Q96N96 652 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 SPZ1Q9BXG8 430 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 PSTPIP2Q9H939 334 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 COMMD8Q9NX08 183 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 NEU3Q9UQ49 428 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 RALGAPA2Q2PPJ7 1873 aa4.28□□□□□ -1.72
PCNX1-205ENST00000553508 PTPRSQ13332 1948 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 NACAE9PAV3 2078 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 E7EWF7 191 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 C5orf67F2Z3F1 127 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 MMP1P03956 469 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 IGKV3-11P04433 115 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 IL9P15248 144 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 MDKP21741 143 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-205ENST00000553508 GPNMBQ14956 572 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 ZNF658BQ4V348 819 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-205ENST00000553508 TCEAL5Q5H9L2 206 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 DLEU7Q6UYE1 221 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 RNF175Q8N4F7 328 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 LRRC17Q8N6Y2 441 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 ZNF713Q8N859 430 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-205ENST00000553508 PIBF1Q8WXW3 757 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 TADA1Q96BN2 335 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 CBWD1Q9BRT8 395 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 PTGES2Q9H7Z7 377 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 ARGLU1Q9NWB6 273 aaPredicted RBP4.27□□□□□ -1.73
PCNX1-205ENST00000553508 ZNF221Q9UK13 617 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 MYH7BA7E2Y1 1941 aa4.27□□□□□ -1.73
PCNX1-205ENST00000553508 EYSQ5T1H1 3165 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 MYO7AQ13402 2215 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 A0A0U1RRA0 63 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 MBLAC1A4D2B0 266 aaPredicted RBP4.26□□□□□ -1.73
PCNX1-205ENST00000553508 PINLYPA6NC86 204 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 NR2C1P13056 603 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 CHMLP26374 656 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 SSTP61278 116 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 RPL32P62910 135 aaKnown RBP4.26□□□□□ -1.73
PCNX1-205ENST00000553508 UBXN1Q04323 297 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 SRYQ05066 204 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 IL17AQ16552 155 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 CCDC12Q8WUD4 166 aaPredicted RBP4.26□□□□□ -1.73
PCNX1-205ENST00000553508 RSPH1Q8WYR4 309 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 NACA2Q9H009 215 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 DDX47Q9H0S4 455 aaKnown RBP4.26□□□□□ -1.73
PCNX1-205ENST00000553508 RBM28Q9NW13 759 aaKnown RBP4.26□□□□□ -1.73
PCNX1-205ENST00000553508 DUS2Q9NX74 493 aaKnown RBP4.26□□□□□ -1.73
PCNX1-205ENST00000553508 NLRC5Q86WI3 1866 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 COL1A2P08123 1366 aa4.26□□□□□ -1.73
PCNX1-205ENST00000553508 BAZ2BQ9UIF8 2168 aaKnown RBP4.26□□□□□ -1.73
PCNX1-205ENST00000553508 EPG5Q9HCE0 2579 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 NFASCO94856 1347 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 IGSF9BQ9UPX0 1349 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 MBTPS2O43462 519 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 CYTH3O43739 400 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 TOXO94900 526 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 CHRNA1P02708 482 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 PTPRZ1P23471 2315 aaPredicted RBP4.25□□□□□ -1.73
PCNX1-205ENST00000553508 CD52P31358 61 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 CAV2P51636 162 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 NAPAP54920 295 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 SRP54P61011 504 aaKnown RBP4.25□□□□□ -1.73
PCNX1-205ENST00000553508 MGAT3Q09327 533 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 DPYSQ14117 519 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 HFEQ30201 348 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 SLX4IPQ5VYV7 408 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 HACD2Q6Y1H2 254 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 PEX5LQ8IYB4 626 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 TMEM185AQ8NFB2 350 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 DNAJB3Q8WWF6 145 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 KRT35Q92764 455 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 CCDC51Q96ER9 411 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 NAP1L3Q99457 506 aaPredicted RBP4.25□□□□□ -1.73
PCNX1-205ENST00000553508 NDUFAF3Q9BU61 184 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 CCSER1Q9C0I3 900 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 LY9Q9HBG7 655 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 TRMT6Q9UJA5 497 aaKnown RBP4.25□□□□□ -1.73
PCNX1-205ENST00000553508 TDRKHQ9Y2W6 561 aaKnown RBP4.25□□□□□ -1.73
PCNX1-205ENST00000553508 UBIAD1Q9Y5Z9 338 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 CEP295Q9C0D2 2601 aa4.25□□□□□ -1.73
PCNX1-205ENST00000553508 MUC3AQ02505 3323 aa4.24□□□□□ -1.73
PCNX1-205ENST00000553508 FAM186AA6NE01 2351 aa4.24□□□□□ -1.73
PCNX1-205ENST00000553508 GSTTP1A0A1W2PQM5 241 aa4.24□□□□□ -1.73
PCNX1-205ENST00000553508 E9PLD3 99 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms