RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TDP1Q9NUW8 608 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 GFOD1Q9NXC2 390 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 TAS2R5Q9NYW4 299 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 CLEC1BQ9P126 229 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 PCDHB9Q9Y5E1 797 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 NYNRINQ9P2P1 1898 aaKnown RBP8.8□□□□□ -1
CTNNA1-243ENST00000540387 NOTCH4Q99466 2003 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 BRWD1Q9NSI6 2320 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 TRBV4-1A0A0J9YWV2 114 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 DRGXA6NNA5 263 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 F5H5T6 163 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 AP4M1O00189 453 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 IMPA2O14732 288 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 PAPLNO95428 1278 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 ADAP00813 363 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 MBP02144 154 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 HCKP08631 526 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 PRPS2P11908 318 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 ETFAP13804 333 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 GNSP15586 552 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 CCR9P51686 369 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 SGSHP51688 502 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 CDH4P55283 916 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 DLX5P56178 289 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 WNT3P56703 355 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 OR10A3P58181 314 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 MTAPQ13126 283 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 RBM39Q14498 530 aaKnown RBP8.8□□□□□ -1
CTNNA1-243ENST00000540387 NCMAPQ5T1S8 102 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 FAM69AQ5T7M9 428 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 C15orf54Q8N8G6 183 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 S100PBPQ96BU1 408 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 POM121Q96HA1 1249 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 MRPL37Q9BZE1 423 aaKnown RBP8.8□□□□□ -1
CTNNA1-243ENST00000540387 TM6SF2Q9BZW4 377 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 DUSP15Q9H1R2 295 aaPredicted RBP8.8□□□□□ -1
CTNNA1-243ENST00000540387 WDR13Q9H1Z4 485 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 NOX3Q9HBY0 568 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 GPN1Q9HCN4 374 aaPredicted RBP8.8□□□□□ -1
CTNNA1-243ENST00000540387 HRASLSQ9HDD0 168 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 NT5MQ9NPB1 228 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 CLDND1Q9NY35 253 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 WASF3Q9UPY6 502 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 PCDHB11Q9Y5F2 797 aa8.8□□□□□ -1
CTNNA1-243ENST00000540387 ZFP37Q9Y6Q3 630 aaPredicted RBP8.8□□□□□ -1
CTNNA1-243ENST00000540387 RHOQP17081 205 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 PAX6P26367 422 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 DDTP30046 118 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 GDF5P43026 501 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 PITPNAQ00169 270 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 MEF2AQ02078 507 aaPredicted RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 LBHQ53QV2 105 aaPredicted RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 EOGTQ5NDL2 527 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 TCEAL6Q6IPX3 200 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 KIAA1161Q6NSJ0 714 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 SFXN4Q6P4A7 337 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 Q6ZNB5 142 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 RNF165Q6ZSG1 346 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 OR52B4Q8NGK2 314 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 HAVCR2Q8TDQ0 301 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 SLC39A7Q92504 469 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 PINK1Q9BXM7 581 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 SEC11CQ9BY50 192 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 POLR1EQ9GZS1 481 aaKnown RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 TSPAN10Q9H1Z9 355 aaPredicted RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 LINC00597Q9H2U6 94 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 C1GALT1Q9NS00 363 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 ASB6Q9NWX5 421 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 STOX2Q9P2F5 926 aaPredicted RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 RCE1Q9Y256 329 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 TP53TG5Q9Y2B4 290 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 EXOSC1Q9Y3B2 195 aaKnown RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 ATG2AQ2TAZ0 1938 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 SNRPGP15A8MWD9 76 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 F5H5P2 479 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 NPIPB9F8W1W9 429 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 FGF10O15520 208 aaPredicted RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 NDUFS3O75489 264 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 ANXA2P07355 339 aaKnown RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 MMP2P08253 660 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 ACP2P11117 423 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 SDHAP31040 664 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 CCR7P32248 378 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 LTBRP36941 435 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 LUMP51884 338 aaPredicted RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 ZNF140P52738 457 aaPredicted RBP8.79□□□□□ -1
CTNNA1-243ENST00000540387 RAB40BQ12829 278 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 RGNQ15493 299 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 FAM111BQ6SJ93 734 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 ZNF614Q8N883 585 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 AVL9Q8NBF6 648 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 CD200R1Q8TD46 325 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 FGF13Q92913 245 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 ZNF354BQ96LW1 612 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 ZNF75AQ96N20 296 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 LRRC3BQ96PB8 259 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 CLCC1Q96S66 551 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 RHBGQ9H310 441 aa8.79□□□□□ -1
CTNNA1-243ENST00000540387 PTGFRNQ9P2B2 879 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms