RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 TCEAL3Q969E4 200 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 PRMT8Q9NR22 394 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 AKAP7Q9P0M2 348 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 LHX3Q9UBR4 397 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 MIOXQ9UGB7 285 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 CRYBG3Q68DQ2 2970 aa3.26□□□□□ -1.89
TOPBP1-206ENST00000508524 C2orf16Q68DN1 1984 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 COL6A6A6NMZ7 2263 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 URB1O60287 2271 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 IDH1O75874 414 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 TGDSO95455 350 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 RETP07949 1114 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 GSTA1P08263 222 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 SDC1P18827 310 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 PITPNBP48739 271 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 PDE7AQ13946 482 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 ZNF699Q32M78 642 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 SLC39A12Q504Y0 691 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 MEDAGQ5VYS4 303 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 CWC27Q6UX04 472 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 IL34Q6ZMJ4 242 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 DPY19L2P2Q6ZN68 376 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 TMEM179BQ7Z7N9 219 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 SERPINA12Q8IW75 414 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 ADAMTS16Q8TE57 1224 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 FAM213AQ9BRX8 229 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 CCSER1Q9C0I3 900 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 MBD2Q9UBB5 411 aa3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 BAZ2AQ9UIF9 1905 aaKnown RBP3.25□□□□□ -1.89
TOPBP1-206ENST00000508524 ASCC3Q8N3C0 2202 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 LRP3O75074 770 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 TOXO94900 526 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 SMIM10L2AP0DMW4 78 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 SMIM10L2BP0DMW5 78 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 NOVA1P51513 510 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 STARD6P59095 220 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 MGAT3Q09327 533 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 C12orf60Q5U649 245 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 ZNF57Q68EA5 555 aaPredicted RBP3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 TRPM8Q7Z2W7 1104 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 MLKLQ8NB16 471 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 COLGALT1Q8NBJ5 622 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 OR10H4Q8NGA5 316 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 C18orf25Q96B23 403 aaPredicted RBP3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 C5orf30Q96GV9 206 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 CARD9Q9H257 536 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 TMEM245Q9H330 911 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 MMADHCQ9H3L0 296 aaPredicted RBP3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 CWH43Q9H720 699 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 ELOVL2Q9NXB9 296 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 DHRS7Q9Y394 339 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 SNX5Q9Y5X3 404 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 MIA3Q5JRA6 1907 aa3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 SPTBN1Q01082 2364 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 SPENQ96T58 3664 aaKnown RBP3.24□□□□□ -1.89
TOPBP1-206ENST00000508524 LAMA4Q16363 1823 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 MYH8P13535 1937 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 LOXHD1Q8IVV2 1947 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 NBASA2RRP1 2371 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 LRRD1A4D1F6 860 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 NPIPA2E9PIF3 369 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 ATP6V1G1O75348 118 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 ZNF254O75437 659 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 PSG2P11465 335 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 CD52P31358 61 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 TNNT3P45378 269 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 STK19P49842 368 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 CAV2P51636 162 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 CCL11P51671 97 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 CCZ1BP86790 482 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 CCZ1P86791 482 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 HTR4Q13639 388 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 WDR43Q15061 677 aaKnown RBP eCLIP3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 HSDL1Q3SXM5 330 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 BNIPLQ7Z465 357 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 MRPL43Q8N983 215 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 BBS1Q8NFJ9 593 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 ATP6V0A1Q93050 837 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 CLDN23Q96B33 292 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 DOCK6Q96HP0 2047 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 SLC5A7Q9GZV3 580 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 KCNMB3Q9NPA1 279 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 SPG11Q96JI7 2443 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 COL5A1P20908 1838 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 NIPBLQ6KC79 2804 aaeCLIP3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 MYH7BA7E2Y1 1941 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 GREB1Q4ZG55 1949 aa3.23□□□□□ -1.89
TOPBP1-206ENST00000508524 HIVEP1P15822 2718 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 RAD50Q92878 1312 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 J3QKU1 62 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 BUB1O43683 1085 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 SYNGR4O95473 234 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 UQCRFS1P1P0C7P4 283 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 CCNE1P24864 410 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 GPC3P51654 580 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 KIAA1024LP59773 190 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 RPS6P62753 249 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 BCL2L1Q07817 233 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 CCDC184Q52MB2 194 aa3.22□□□□□ -1.89
TOPBP1-206ENST00000508524 OR2B11Q5JQS5 317 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms