RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 HLCSP50747 726 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 RAD23AP54725 363 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 SUMO3P55854 103 aaPredicted RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 ISL1P61371 349 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 TSPAN31Q12999 210 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 SNTA1Q13424 505 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 RAPSNQ13702 412 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 KEAP1Q14145 624 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 PDK3Q15120 406 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 QPRTQ15274 297 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 MEP1AQ16819 746 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 CTU2Q2VPK5 515 aaKnown RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 ALG10BQ5I7T1 473 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 OR5M10Q6IEU7 315 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 ZNF730Q6ZMV8 503 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 P3H2Q8IVL5 708 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 LINC00471Q8N535 108 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 TMCO5AQ8N6Q1 288 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 SNIP1Q8TAD8 396 aaKnown RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 CYGBQ8WWM9 190 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 HRASLS5Q96KN8 279 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 MUS81Q96NY9 551 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 CCNL2Q96S94 520 aaPredicted RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 LHPPQ9H008 270 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 RIBC2Q9H4K1 309 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 DEPPQ9NTK1 212 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 CNIH4Q9P003 139 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 MED11Q9P086 117 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 KIF17Q9P2E2 1029 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 OSGIN1Q9UJX0 560 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 FBXL2Q9UKC9 423 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 MSRB2Q9Y3D2 182 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 FRYQ5TBA9 3013 aa9.44□□□□□ -0.9
TPM3-217ENST00000504663 SPENQ96T58 3664 aaKnown RBP9.44□□□□□ -0.9
TPM3-217ENST00000504663 CACNA1AO00555 2505 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 APC2O95996 2303 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ZC3H12DA2A288 527 aaKnown RBP9.43□□□□□ -0.9
TPM3-217ENST00000504663 PINLYPA6NC86 204 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TRIM64A6NGJ6 449 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ARGFXA6NJG6 315 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 GTPBP1O00178 669 aaKnown RBP9.43□□□□□ -0.9
TPM3-217ENST00000504663 BCKDKO14874 412 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 EFNA2O43921 213 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 GMFGO60234 142 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 CDC40O60508 579 aaKnown RBP eCLIP9.43□□□□□ -0.9
TPM3-217ENST00000504663 CEACAM4O75871 244 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 SOX14O95416 240 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 IGF2P01344 180 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 OSMP13725 252 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 PGCP20142 388 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 IL11P20809 199 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TACR3P29371 465 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 CCR4P51679 360 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 CRISP1P54107 249 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 LTBQ06643 244 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 C17orf67Q0P5P2 114 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TUBA3CQ13748 450 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 CBFBQ13951 182 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TMEM44Q2T9K0 475 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 PLPPR5Q32ZL2 321 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 SLX4IPQ5VYV7 408 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 C12orf73Q69YU5 71 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 SLC30A6Q6NXT4 461 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TUBA3EQ6PEY2 450 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ARSKQ6UWY0 536 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ZNF620Q6ZNG0 422 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 RTL4Q6ZR62 310 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 RASSF6Q6ZTQ3 369 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TMPRSS11FQ6ZWK6 438 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ADGRG3Q86Y34 549 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 GPALPP1Q8IXQ4 340 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 RNF113BQ8IZP6 322 aaKnown RBP9.43□□□□□ -0.9
TPM3-217ENST00000504663 CYP4Z2PQ8N1L4 340 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 GALNT16Q8N428 558 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 MDS2Q8NDY4 140 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 PIGXQ8TBF5 258 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 GNPDA2Q8TDQ7 276 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 DNAJA4Q8WW22 397 aaPredicted RBP9.43□□□□□ -0.9
TPM3-217ENST00000504663 APH1BQ8WW43 257 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 THAP4Q8WY91 577 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TMEM41AQ96HV5 264 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 CNBD2Q96M20 576 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 FER1L6-AS2Q96M78 137 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 SIGLEC12Q96PQ1 595 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TMEM43Q9BTV4 400 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 PTDSS2Q9BVG9 487 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 UCK2Q9BZX2 261 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ENKD1Q9H0I2 346 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ZNF552Q9H707 407 aaPredicted RBP9.43□□□□□ -0.9
TPM3-217ENST00000504663 METTL7AQ9H8H3 244 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 SLC25A19Q9HC21 320 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 MED17Q9NVC6 651 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 HPF1Q9NWY4 346 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 ANKRD10Q9NXR5 420 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TAS2R10Q9NYW0 307 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 KLRF1Q9NZS2 232 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 LOC400499M0QZD8 3231 aa9.43□□□□□ -0.9
TPM3-217ENST00000504663 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms