RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 SLC17A5Q9NRA2 495 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 ACSS1Q9NUB1 689 aaPredicted RBP9.92□□□□□ -0.82
BRCA1-213ENST00000476777 ZDHHC18Q9NUE0 388 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 MOKQ9UQ07 419 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 DTNAQ9Y4J8 743 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 CCL27Q9Y4X3 112 aa9.92□□□□□ -0.82
BRCA1-213ENST00000476777 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 SULT2B1O00204 365 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF264O43296 627 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 AKAP10O43572 662 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 EIF4E2O60573 245 aaKnown RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 TBX19O60806 448 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 DNAJA2O60884 412 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 MRPL33O75394 65 aaKnown RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 SLU7O95391 586 aaKnown RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 STAMBPO95630 424 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 HMGN2P05204 90 aaKnown RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 TACSTD2P09758 323 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 EFNA1P20827 205 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 GIFP27352 417 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 CCR4P51679 360 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 CHN2P52757 468 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 SLC16A1P53985 500 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 ATP12AP54707 1039 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 CDH15P55291 814 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 CSNK2A1P68400 391 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 PDE7AQ13946 482 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 CBFBQ13951 182 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 LASP1Q14847 261 aaKnown RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 SYT14P1Q58G82 188 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 C9orf135Q5VTT2 229 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 CDC73Q6P1J9 531 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 DEF8Q6ZN54 512 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 SLC46A3Q7Z3Q1 461 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF454Q8N9F8 522 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 C1orf162Q8NEQ5 155 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 TOR1AIP2Q8NFQ8 470 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 ARL8AQ96BM9 186 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 PPCDCQ96CD2 204 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 KCNF1Q9H3M0 494 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 PIGUQ9H490 435 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 GSTO2Q9H4Y5 243 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 REEP4Q9H6H4 257 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 SIRT3Q9NTG7 399 aaPredicted RBP9.91□□□□□ -0.82
BRCA1-213ENST00000476777 SH3BP4Q9P0V3 963 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 DCTN4Q9UJW0 460 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF180Q9UJW8 692 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 AMDHD2Q9Y303 409 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 KCNE3Q9Y6H6 103 aa9.91□□□□□ -0.82
BRCA1-213ENST00000476777 WNK1Q9H4A3 2382 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 PRKDCP78527 4128 aaKnown RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 B9A039 149 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 GPR171O14626 319 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 SEC22BO75396 215 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 PRPH2P23942 346 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 APEX1P27695 318 aaKnown RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 SESN3P58005 492 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 ACTG1P63261 375 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 DCST2Q5T1A1 773 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 C1QTNF12Q5T7M4 302 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 RINLQ6ZS11 566 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 SPATA19Q7Z5L4 167 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 RELL1Q8IUW5 271 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 SLC22A9Q8IVM8 553 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 CCDC103Q8IW40 242 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 TMCO5AQ8N6Q1 288 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 ZNF614Q8N883 585 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 PIGXQ8TBF5 258 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 ST8SIA1Q92185 356 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 GCDHQ92947 438 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 CHMP6Q96FZ7 201 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 METTL2AQ96IZ6 378 aaKnown RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 THUMPD3Q9BV44 507 aaKnown RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 PLK3Q9H4B4 646 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 METTL17Q9H7H0 456 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 TNFRSF12AQ9NP84 129 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 RRAGDQ9NQL2 400 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 SERINC1Q9NRX5 453 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 CA10Q9NS85 328 aa9.9□□□□□ -0.82
BRCA1-213ENST00000476777 ZCCHC3Q9NUD5 404 aaKnown RBP9.9□□□□□ -0.82
BRCA1-213ENST00000476777 FAM157AC9JC47 383 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 POC1B-GALNT4F8VUJ3 575 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 SNUPNO95149 360 aaKnown RBP9.89□□□□□ -0.83
BRCA1-213ENST00000476777 UBL4AP11441 157 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 DAOP14920 347 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 PGCP20142 388 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 PPOXP50336 477 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 IDH3GP51553 393 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-213ENST00000476777 DVL1P1P54792 670 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-213ENST00000476777 PRPS1P60891 318 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 MERTKQ12866 999 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 SKP2Q13309 424 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 EFNB3Q15768 340 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 ADIPOQQ15848 244 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 FAM216AQ8WUB2 273 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 SLC25A43Q8WUT9 341 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-213ENST00000476777 ARL5BQ96KC2 179 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 FCRL1Q96LA6 429 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 TSSK3Q96PN8 268 aa9.89□□□□□ -0.83
BRCA1-213ENST00000476777 SNX18Q96RF0 628 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms