RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 MED31Q9Y3C7 131 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 PCDHGB6Q9Y5F9 930 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 SPIN1Q9Y657 262 aaPredicted RBP5.91□□□□□ -1.46
SPEN-204ENST00000471538 V9GYH0 126 aa5.91□□□□□ -1.46
SPEN-204ENST00000471538 TDRD6O60522 2096 aaKnown RBP5.9□□□□□ -1.46
SPEN-204ENST00000471538 TP53BP1Q12888 1972 aaPredicted RBP5.9□□□□□ -1.46
SPEN-204ENST00000471538 ADAMTS20P59510 1910 aa5.9□□□□□ -1.46
SPEN-204ENST00000471538 NUP210LQ5VU65 1888 aa5.9□□□□□ -1.46
SPEN-204ENST00000471538 PNMA8CA0A1B0GUJ8 204 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 TRDV1A0A1B0GX56 115 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 DCDC2BA2VCK2 349 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 FAM183AA6NL82 134 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 TTC36A6NLP5 189 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 LOC110117498-PIK3R3F6TDL0 507 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 BOLA2-SMG1P6H3BVE0 249 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 AQP9O43315 295 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 HCN1O60741 890 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 CDC123O75794 336 aaPredicted RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 CDRT1O95170 752 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 RCBTB2O95199 551 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 PTTG1O95997 202 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 HNRNPCP07910 306 aaKnown RBP eCLIP5.9□□□□□ -1.47
SPEN-204ENST00000471538 TSPAN19P0C672 248 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 CLEC2LP0C7M8 214 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 MAOAP21397 527 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 GALP22466 123 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 MAOBP27338 520 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 GTF2E2P29084 291 aaKnown RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 TNFSF8P32971 234 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 TGM4P49221 684 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 RORCP51449 518 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ATP12AP54707 1039 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 PSMD4P55036 377 aaKnown RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 FABP5Q01469 135 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 BDH1Q02338 343 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 STX4Q12846 297 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 DNASE1L3Q13609 305 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ZNHIT3Q15649 155 aaPredicted RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 ZNF79Q15937 498 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 C14orf28Q4W4Y0 310 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 TCTE1Q5JU00 501 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ARMC4Q5T2S8 1044 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 FNDC7Q5VTL7 733 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 C22orf42Q6IC83 251 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 PLBD1Q6P4A8 553 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SMARCD3Q6STE5 483 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ZNF322Q6U7Q0 402 aaPredicted RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 KIRREL2Q6UWL6 708 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ZNF550Q7Z398 422 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 LHFPL3Q86UP9 236 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 BPHLQ86WA6 291 aaPredicted RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 CADM3Q8N126 398 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SDR16C5Q8N3Y7 309 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 KLHL36Q8N4N3 616 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 BCORP1Q8N888 145 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SYT14Q8NB59 555 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 FAM71CQ8NEG0 241 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 OR52L1Q8NGH7 329 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 C16orf52Q8NHV5 167 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 GRHL3Q8TE85 626 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SPRYD4Q8WW59 207 aaPredicted RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 OIT3Q8WWZ8 545 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 PTP4A1Q93096 173 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ARSGQ96EG1 525 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 PTCHD1Q96NR3 888 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 DCLRE1CQ96SD1 692 aaKnown RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 TM9SF2Q99805 663 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 COQ7Q99807 217 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SLC30A2Q9BRI3 323 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 PELOQ9BRX2 385 aaKnown RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 CCDC32Q9BV29 185 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 KATNB1Q9BVA0 655 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 FOXQ1Q9C009 403 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 TRIM2Q9C040 744 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SPRTNQ9H040 489 aaPredicted RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 OR10A5Q9H207 317 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 MIXL1Q9H2W2 232 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 TMEM27Q9HBJ8 222 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 MCCC2Q9HCC0 563 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 CPNE5Q9HCH3 593 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ABCB10Q9NRK6 738 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 LANCL2Q9NS86 450 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SNTG1Q9NSN8 517 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 CHCHD3Q9NX63 227 aaKnown RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 SEMA5BQ9P283 1151 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 SERTAD3Q9UJW9 196 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ICAM5Q9UMF0 924 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 BAIAP2Q9UQB8 552 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 ERVK-19Q9WJR5 959 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 CAB39Q9Y376 341 aaPredicted RBP5.9□□□□□ -1.47
SPEN-204ENST00000471538 RNF215Q9Y6U7 377 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 LAMA1P25391 3075 aa5.9□□□□□ -1.47
SPEN-204ENST00000471538 FLNBO75369 2602 aaKnown RBP5.89□□□□□ -1.47
SPEN-204ENST00000471538 EML5Q05BV3 1969 aa5.89□□□□□ -1.47
SPEN-204ENST00000471538 TRAV27A0A087WT01 109 aa5.89□□□□□ -1.47
SPEN-204ENST00000471538 IGKV3D-11A0A0A0MRZ8 115 aa5.89□□□□□ -1.47
SPEN-204ENST00000471538 CCDC163A0A0D9SF12 145 aa5.89□□□□□ -1.47
SPEN-204ENST00000471538 SHISA3A0PJX4 238 aa5.89□□□□□ -1.47
SPEN-204ENST00000471538 ZC3H12DA2A288 527 aaKnown RBP5.89□□□□□ -1.47
SPEN-204ENST00000471538 OR2W5A6NFC9 320 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms