RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 BPGMP07738 259 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 NUDT17P0C025 328 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 CLDN8P56748 225 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 ARHGAP11BQ3KRB8 267 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 TIMM23BQ5SRD1 257 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF100Q8IYN0 542 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 ZNF433Q8N7K0 673 aaPredicted RBP14.21□□□□□ -0.13
COL7A1-204ENST00000462475 FAM71CQ8NEG0 241 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 MUCL1Q96DR8 90 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 DNAJA3Q96EY1 480 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 HS6ST2Q96MM7 605 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 OR51I1Q9H343 314 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 ALG2Q9H553 416 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 SERINC1Q9NRX5 453 aa14.21□□□□□ -0.13
COL7A1-204ENST00000462475 NUP214P35658 2090 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 IGKV3D-15A0A087WSY6 115 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 OR5H1A6NKK0 313 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 DUXAA6NLW8 204 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 ZNF716A6NP11 495 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 KIAA0513O60268 411 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 RAD51DO75771 328 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 PGM3O95394 542 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 PGCP20142 388 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 PGM1P36871 562 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 CSNK2A1P68400 391 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 EMX2Q04743 252 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 SPOCK1Q08629 439 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 FUT5Q11128 374 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 PDCD2Q16342 344 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 TYW3Q6IPR3 259 aaKnown RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 TNFAIP8L2Q6P589 184 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 EIF3MQ7L2H7 374 aaKnown RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 C16orf62Q7Z3J2 963 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 HMGN2P46Q86SG4 172 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 OR4A15Q8NGL6 344 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 SPATA3Q8NHX4 192 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 SLC25A43Q8WUT9 341 aaPredicted RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 TMEM234Q8WY98 164 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 PPP1R36Q96LQ0 422 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 CCDC106Q9BWC9 280 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 CTPS2Q9NRF8 586 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 ASIC5Q9NY37 505 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 NOP53Q9NZM5 478 aaKnown RBP14.2□□□□□ -0.14
COL7A1-204ENST00000462475 EMC3Q9P0I2 261 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 CR1P17927 2039 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 ABCA1O95477 2261 aa14.2□□□□□ -0.14
COL7A1-204ENST00000462475 CHD3Q12873 2000 aaKnown RBP14.19□□□□□ -0.14
COL7A1-204ENST00000462475 GOLGA8QA0A0J9YX86 632 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 GOLGA8OA6NCC3 632 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 GOLGA8NF8WBI6 632 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 RNASET2O00584 256 aaKnown RBP14.19□□□□□ -0.14
COL7A1-204ENST00000462475 ITM2AO43736 263 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 CD5LO43866 347 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 TP53P04637 393 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-204ENST00000462475 OR12D1P0DN82 309 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 TFPIP10646 304 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 ETV4P43268 484 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 PLAURQ03405 335 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 IFFO1Q0D2I5 559 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 MAD2L1Q13257 205 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-204ENST00000462475 FBXW9Q5XUX1 488 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 MTDHQ86UE4 582 aaKnown RBP14.19□□□□□ -0.14
COL7A1-204ENST00000462475 ANKRD46Q86W74 232 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 OR52N5Q8NH56 324 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 MIPOL1Q8TD10 442 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 RAB8BQ92930 207 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 ARL5BQ96KC2 179 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 PKNOX2Q96KN3 472 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 GRIP2Q9C0E4 1043 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 BARX1Q9HBU1 254 aaPredicted RBP14.19□□□□□ -0.14
COL7A1-204ENST00000462475 YAE1D1Q9NRH1 226 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 EXD2Q9NVH0 621 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 FAIMQ9NVQ4 179 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 B3GALT5Q9Y2C3 310 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 WDR45Q9Y484 360 aa14.19□□□□□ -0.14
COL7A1-204ENST00000462475 IGHV4-30-2A0A087WSY4 118 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 A0A1W2PR80 420 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 CLDN24A6NM45 220 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 E7EQL1 145 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 TLX2O43763 284 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-204ENST00000462475 TYROBPO43914 113 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 SSX4O60224 188 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 SCN2BO60939 215 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 NTF4P34130 210 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 RYKP34925 604 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 FOXG1P55316 489 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-204ENST00000462475 PHC1P78364 1004 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 IRX1P78414 480 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-204ENST00000462475 PDK3Q15120 406 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 EMBQ6PCB8 327 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 FRRS1Q6ZNA5 592 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 SSX8Q7RTT4 187 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 P2RY8Q86VZ1 359 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 UBE2J2Q8N2K1 259 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 PIAS4Q8N2W9 510 aaPredicted RBP14.18□□□□□ -0.14
COL7A1-204ENST00000462475 ZNF781Q8N8C0 355 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 OR8J2Q8NGG1 315 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 ZNF563Q8TA94 476 aa14.18□□□□□ -0.14
COL7A1-204ENST00000462475 XAGE5Q8WWM1 108 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms