RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ZNF100Q8IYN0 542 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 ZNF525Q8N782 197 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 NOA1Q8NC60 698 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 KCNK17Q96T54 332 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 ZNF350Q9GZX5 532 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 MOV10Q9HCE1 1003 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 EXOSC3Q9NQT5 275 aaKnown RBP12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 POLE3Q9NRF9 147 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 ASB6Q9NWX5 421 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 PRDM4Q9UKN5 801 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 AMDHD2Q9Y303 409 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 DNAJC15Q9Y5T4 150 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 FKBP7Q9Y680 259 aa12.8□□□□□ -0.36
DNMT3A-207ENST00000461228 SERINC4A6NH21 518 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 KIAA0513O60268 411 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 ZNF16P17020 682 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 SRD5A1P18405 259 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 PGCP20142 388 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 IGFBP5P24593 272 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 EDNRAP25101 427 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 APOBEC1P41238 236 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 LSM12Q3MHD2 195 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 TIGD2Q4W5G0 525 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 CLEC6AQ6EIG7 209 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 FAM166AQ6J272 317 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 TMCO5AQ8N6Q1 288 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 CEP112Q8N8E3 955 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 MIPOL1Q8TD10 442 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 IFT81Q8WYA0 676 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 PPP3R2Q96LZ3 170 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 ZNF317Q96PQ6 595 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 OR5B2Q96R09 309 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 C19orf24Q9BVV8 132 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 TXLNGYQ9BZA5 131 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 BHLHE41Q9C0J9 482 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 OBP2BQ9NPH6 170 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 ACER3Q9NUN7 267 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 POU2F3Q9UKI9 436 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 KCNS2Q9ULS6 477 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 SLC35A3Q9Y2D2 325 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 PTGDR2Q9Y5Y4 395 aa12.79□□□□□ -0.36
DNMT3A-207ENST00000461228 IGHV3-15A0A0B4J1V0 119 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 A0A1W2PNR3 127 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 GTPBP1O00178 669 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 AKAP10O43572 662 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 LMX1BO60663 402 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 RAD51DO75771 328 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 AGR2O95994 175 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 CPA3P15088 417 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 SERPINB5P36952 375 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 CCT3P49368 545 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 PHC1P78364 1004 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 H3F3AP84243 136 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 TP53BP2Q13625 1128 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 GABRA6Q16445 453 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 GRINAQ7Z429 371 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 COQ8BQ96D53 544 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 OTUB1Q96FW1 271 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 SDF2Q99470 211 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 CCDC106Q9BWC9 280 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 PIF1Q9H611 641 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 ANKZF1Q9H8Y5 726 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 CHRNA9Q9UGM1 479 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 SLC9A8Q9Y2E8 581 aa12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 NOSIPQ9Y314 301 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-207ENST00000461228 SULT2B1O00204 365 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 EIF1BO60739 113 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 STX11O75558 287 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 ITGA5P08648 1049 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 PRPS1L1P21108 318 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 APOBEC3AP31941 199 aaPredicted RBP12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 SESN3P58005 492 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 TGFBR3Q03167 851 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 SPOCK1Q08629 439 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 SQLEQ14534 574 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 PCLAFQ15004 111 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 C3orf36Q3SXR2 165 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 PDZK1Q5T2W1 519 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 EIF3MQ7L2H7 374 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 RIMKLAQ8IXN7 391 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 EIF1ADQ8N9N8 165 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 CLHC1Q8NHS4 586 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 TWIST2Q8WVJ9 160 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 ZNF524Q96C55 264 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 ZIM3Q96PE6 472 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 OR7D2Q96RA2 312 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 PRPF18Q99633 342 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 PIMREGQ9BSJ6 248 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 ASIC5Q9NY37 505 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 TRAPPC4Q9Y296 219 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 PMF1-BGLAPU3KQ54 211 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 TENM1Q9UKZ4 2725 aa12.77□□□□□ -0.37
DNMT3A-207ENST00000461228 CIB4A0PJX0 185 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 NPHS1O60500 1241 aa12.76□□□□□ -0.37
DNMT3A-207ENST00000461228 CSTAP01040 98 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms