RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 ARHGAP31Q2M1Z3 1444 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 KANK1Q14678 1352 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 TNRQ92752 1358 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 KIF16BQ96L93 1317 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 FANCIQ9NVI1 1328 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 A0A1B0GWJ7 208 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 A0A1W2PNU3 283 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ESYT2A0FGR8 921 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 KLLNB2CW77 178 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 B4DXG7 233 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 KIF2AO00139 706 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 MSH4O15457 936 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ZSCAN12O43309 604 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 NEBLO76041 1014 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 B3GAT3O94766 335 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 CA1P00915 261 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 HSPB1P04792 205 aaKnown RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 KRT8P05787 483 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ALOX5P09917 674 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 DRD5P21918 477 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 PAX7P23759 505 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SOX6P35712 828 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 RGS4P49798 205 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 EFNA3P52797 238 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 AP3M2P53677 418 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 HSD17B7P56937 341 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 STX17P56962 302 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 LYZP61626 148 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 NDPQ00604 133 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 OC90Q02509 493 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 RAB40BQ12829 278 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SELPLGQ14242 412 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 LAGE3Q14657 143 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 PDK4Q16654 411 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 TATDN3Q17R31 274 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SLC5A12Q1EHB4 618 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 OR2B11Q5JQS5 317 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 C9orf129Q5T035 196 aaKnown RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ATF7IP2Q5U623 682 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 LIPNQ5VXI9 398 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ATL3Q6DD88 541 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SLC25A24Q6NUK1 477 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 CXCL17Q6UXB2 119 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 DNM1P46Q6ZS02 220 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 HSD17B13Q7Z5P4 300 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF589Q86UQ0 364 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 VASH2Q86V25 355 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ZDHHC21Q8IVQ6 265 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 NRMQ8IXM6 262 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF100Q8IYN0 542 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 LRRC43Q8N309 656 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 TEX9Q8N6V9 391 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 C14orf178Q8N769 122 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 C15orf54Q8N8G6 183 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ATP6V0D2Q8N8Y2 350 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 OR2L5Q8NG80 312 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 OR5L2Q8NGL0 311 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SPRYD4Q8WW59 207 aaPredicted RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 OSTF1Q92882 214 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 RAB7BQ96AH8 199 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF414Q96IQ9 312 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 C12orf66Q96MD2 445 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SLC6A7Q99884 636 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ALG12Q9BV10 488 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 SPATA16Q9BXB7 569 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 TMEM117Q9H0C3 514 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ELOVL3Q9HB03 270 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 CHRNA9Q9UGM1 479 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 RIMS3Q9UJD0 308 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 USP16Q9Y5T5 823 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 NOTCH2Q04721 2471 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 CLTCQ00610 1675 aaKnown RBP1.77□□□□□ -2.13
PTPRC-208ENST00000427110 PREX1Q8TCU6 1659 aa1.77□□□□□ -2.13
PTPRC-208ENST00000427110 ADGRB1O14514 1584 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 DIP2CQ9Y2E4 1556 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ASXL1Q8IXJ9 1541 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ERVK-7P63135 1459 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 RALGAPA1Q6GYQ0 2036 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 PIK3C2GO75747 1445 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZFYVE9O95405 1425 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 NOS1P29475 1434 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 LOC100131303A0A0U1RQF7 123 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 TUBAL3A6NHL2 446 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 EPOPA6NHQ4 379 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 A8MU10 97 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 E7ESA3 106 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 K7EQM0 130 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 SULT2B1O00204 365 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CDX4O14627 284 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 XPO1O14980 1071 aaKnown RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ANGPT2O15123 496 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF264O43296 627 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 LYPLA1O75608 230 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 UGT2B17O75795 530 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 KIAA0754O94854 1291 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 LYPD3O95274 346 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ACTL6AO96019 429 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 IGHV3-23P01764 117 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms