RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 KIRREL2Q6UWL6 708 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TTLL10Q6ZVT0 673 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ARIH2OSQ8N7S6 290 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC37A3Q8NCC5 494 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR4F15Q8NGB8 312 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR51G2Q8NGK0 314 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PTPMT1Q8WUK0 201 aaPredicted RBP13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GATAD2BQ8WXI9 593 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ACOT12Q8WYK0 555 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ALG8Q9BVK2 526 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF304Q9HCX3 659 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 BABAM2Q9NXR7 383 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DTX4Q9Y2E6 619 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DAPL1A0PJW8 107 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 C12orf71A8MTZ7 269 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PLD2O14939 933 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CD1AP06126 327 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MAOBP27338 520 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PPP3R1P63098 170 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CLPPQ16740 277 aaPredicted RBP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TBC1D25Q3MII6 688 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PAMR1Q6UXH9 720 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MEX3DQ86XN8 651 aaKnown RBP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TMEM151BQ8IW70 566 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SIRT6Q8N6T7 355 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 FAM181AQ8N9Y4 354 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ATP6V1C2Q8NEY4 427 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 OR4N2Q8NGD1 307 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 KISS1RQ969F8 398 aaPredicted RBP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 KCTD12Q96CX2 325 aaKnown RBP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TEAD3Q99594 435 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TGIF2Q9GZN2 237 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SPRTNQ9H040 489 aaPredicted RBP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CAPN10Q9HC96 672 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MCCC2Q9HCC0 563 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RHBDL2Q9NX52 303 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CHRNA9Q9UGM1 479 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 K7ESF4 209 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IMPA2O14732 288 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MAGEB3O15480 346 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RGS5O15539 181 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF264O43296 627 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TMEM127O75204 238 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CDRT1O95170 752 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SBK2P0C263 348 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SDC2P34741 201 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MTNR1BP49286 362 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CSNK1EP49674 416 aaKnown RBP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 IFITM3Q01628 133 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DOC2BQ14184 412 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 STEAP3Q658P3 488 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 C22orf42Q6IC83 251 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MZT2AQ6P582 158 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 THSD4Q6ZMP0 1018 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 LHFPL3Q86UP9 236 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC35F3Q8IY50 421 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SYS1Q8N2H4 156 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CADM2Q8N3J6 435 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MS4A15Q8N5U1 240 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 GDPD1Q8N9F7 314 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 C3orf49Q96BT1 292 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ELF4Q99607 663 aaPredicted RBP13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SNTG1Q9NSN8 517 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ZNF229Q9UJW7 825 aa13.36□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ARPC4-TTLL3A0A0A6YYG9 625 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ELOA3DA6NLF2 546 aaPredicted RBP13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HRKO00198 91 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SOCS6O14544 535 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TBX1O43435 398 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 PLPP2O43688 288 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 EIF4E2O60573 245 aaKnown RBP13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RGS9O75916 674 aaPredicted RBP13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SERPINA3P01011 423 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CELP19835 753 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TNFSF8P32971 234 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 CD97P48960 835 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RPS7P62081 194 aaKnown RBP13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 RPS25P62851 125 aaKnown RBP13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ACY1Q03154 408 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MRPL28Q13084 256 aaKnown RBP13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SKP2Q13309 424 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ELOA3BQ3SY89 546 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 EMC4Q5J8M3 183 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 HLA-DQA1Q5Y7H0 255 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 C5orf46Q6UWT4 87 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SLC29A4Q7RTT9 530 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 MISPQ8IVT2 679 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 DEFB119Q8N690 84 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 BBS1Q8NFJ9 593 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ELOA3Q8NG57 546 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 NEIL3Q8TAT5 605 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 SPRYD4Q8WW59 207 aaPredicted RBP13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 BARHL1Q9BZE3 327 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 LAT2Q9GZY6 243 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 ABCB10Q9NRK6 738 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 UCKL1Q9NWZ5 548 aa13.35□□□□□ -0.27
HLA-DPA1-242ENST00000419277 TMEM184BQ9Y519 407 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms