RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SLC34A3Q8N130 599 aa17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 ZNF614Q8N883 585 aa17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 M1APQ8TC57 530 aa17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 ELP5Q8TE02 316 aa17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 NACC2Q96BF6 587 aa17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 ARHGDIGQ99819 225 aa17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 NMNAT1Q9HAN9 279 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 ZBTB20Q9HC78 741 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 TMCC3Q9ULS5 477 aa17.75■□□□□ 0.43
PDLIM2-204ENST00000397760 TMEM200CA6NKL6 621 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 NPIPB9F8W1W9 429 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 OSMP13725 252 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 RNF144AP50876 292 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 NRG3P56975 720 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 PSPHP78330 225 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 KRR1Q13601 381 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 RNLSQ5VYX0 342 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 DEF8Q6ZN54 512 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 C16orf47Q6ZP98 133 aaPredicted RBP17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 DTX1Q86Y01 620 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 OR6T1Q8NGN1 323 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 OR4C3Q8NH37 302 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 OMA1Q96E52 524 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 ADOQ96SZ5 270 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 DEFB126Q9BYW3 111 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 ZNF160Q9HCG1 818 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 PEX16Q9Y5Y5 336 aa17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 MRPS18BQ9Y676 258 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-204ENST00000397760 WWP2O00308 870 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 FAAHO00519 579 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 FRS3O43559 492 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 GASTP01350 101 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 ABCD3P28288 659 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 IL12BP29460 328 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 S100A5P33763 92 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 ETV6P41212 452 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 MRPL2Q5T653 305 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 TCTN3Q6NUS6 607 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 PTCHD4Q6ZW05 846 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 HOXD1Q9GZZ0 328 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 ARMC7Q9H6L4 198 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 SIAEQ9HAT2 523 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 MMP25Q9NPA2 562 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 ACAD8Q9UKU7 415 aa17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 CNOT1A5YKK6 2376 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-204ENST00000397760 PNMA8CA0A1B0GUJ8 204 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 TSPAN2O60636 221 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 DXOO77932 396 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 SNX4O95219 450 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 UTS2O95399 124 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 PTHP01270 115 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 CELA2AP08217 269 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 GSSP48637 474 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 CAMK2BQ13554 666 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 IL10RAQ13651 578 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 LINC00471Q8N535 108 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 CDADC1Q9BWV3 514 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 UCK2Q9BZX2 261 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 SLC25A19Q9HC21 320 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 AMBNQ9NP70 447 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 CFAP54Q96N23 3096 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 CDHR4A6H8M9 788 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 SEMA7AO75326 666 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 SDHBP21912 280 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 LCN1P31025 176 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 SOX6P35712 828 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 NUDT6P53370 316 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 UGT2B15P54855 530 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 SLX4IPQ5VYV7 408 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 GDPGP1Q6ZNW5 385 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 GTPBP3Q969Y2 492 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 UBQLN4Q9NRR5 601 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 P4HTMQ9NXG6 502 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 FLRT3Q9NZU0 649 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 MYOTQ9UBF9 498 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 IL17BQ9UHF5 180 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 FBXL4Q9UKA2 621 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 NPFFR2Q9Y5X5 522 aa17.72■□□□□ 0.43
PDLIM2-204ENST00000397760 CCRL2O00421 344 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 FFAR1O14842 300 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 HPP00738 406 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 HPGDP15428 266 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 PNLIPRP2P54317 469 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 RGS8P57771 180 aaPredicted RBP17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 ALDH6A1Q02252 535 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 GANABQ14697 944 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 TGIF1Q15583 401 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 KLHL26Q53HC5 615 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 DCST1Q5T197 706 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 DESI1Q6ICB0 168 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 RAB43Q86YS6 212 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 LYSMD2Q8IV50 215 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 ZNF527Q8NB42 609 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 MGLLQ99685 303 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 RHCGQ9UBD6 479 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 REV1Q9UBZ9 1251 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 ITGB1BP2Q9UKP3 347 aa17.71■□□□□ 0.43
PDLIM2-204ENST00000397760 MASP2O00187 686 aa17.7■□□□□ 0.42
PDLIM2-204ENST00000397760 ZNF354AO60765 605 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms