RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 PRR23D2P0DMB1 279 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 HPGDP15428 266 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 PSMB9P28065 219 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 CD1CP29017 333 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 MAT2AP31153 395 aaKnown RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 KCTD18Q6PI47 426 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 SMARCD3Q6STE5 483 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 IGF2-ASQ6U949 168 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 MAMDC2Q7Z304 686 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 OR9A2Q8NGT5 310 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 MRGPRX4Q96LA9 322 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 ALOXE3Q9BYJ1 711 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 OR10A5Q9H207 317 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 SNTG1Q9NSN8 517 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 GMPR2Q9P2T1 348 aaKnown RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 CHRNA9Q9UGM1 479 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 OR10H1Q9Y4A9 318 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 KRBA1A5PL33 1030 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 UNC119BA6NIH7 251 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 DHRS7CA6NNS2 312 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 PTGES3LE9PB15 166 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 BHLHE40O14503 412 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 PLD2O14939 933 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 CT45A8P0DMV1 189 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 CT45A9P0DMV2 189 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 CT45A2Q5DJT8 189 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 HBMQ6B0K9 141 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 MZT2AQ6P582 158 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 MFSD4AQ8N468 514 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 SLC22A8Q8TCC7 542 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 GPR148Q8TDV2 347 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 SH3YL1Q96HL8 342 aaPredicted RBP5.4□□□□□ -1.54
PTPRD-206ENST00000397617 COX4I2Q96KJ9 171 aa5.4□□□□□ -1.54
PTPRD-206ENST00000397617 UTRNP46939 3433 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 PIGBOS1A0A0B4J2F0 54 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 EPPINO95925 133 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 FOSL2P15408 326 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 POLR2IP36954 125 aaKnown RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 DEF8Q6ZN54 512 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 CCDC103Q8IW40 242 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 SLC25A46Q96AG3 418 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 EFHD2Q96C19 240 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 ERLEC1Q96DZ1 483 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 ALG12Q9BV10 488 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 DSN1Q9H410 356 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 CAPN10Q9HC96 672 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 CYP8B1Q9UNU6 501 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 GASTP01350 101 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 APOBEC1P41238 236 aaKnown RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 ACAA2P42765 397 aaKnown RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 GANABQ14697 944 aaKnown RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 PCK2Q16822 640 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 XKRXQ6PP77 449 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 OR5W2Q8NH69 310 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 HDHD5Q9BXW7 423 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 PCYT1BQ9Y5K3 369 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 TNRC6BQ9UPQ9 1833 aaKnown RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF879B4DU55 563 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 J3QRE1 110 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 ENTPD6O75354 484 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 TP53P04637 393 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 NT5EP21589 574 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 PCSK6P29122 969 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 CLDN2P57739 230 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 RIPPLY2Q5TAB7 128 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 DPPA2Q7Z7J5 298 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 TCEANCQ8N8B7 351 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 INTS12Q96CB8 462 aaKnown RBP5.4□□□□□ -1.55
PTPRD-206ENST00000397617 MED30Q96HR3 178 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 NIPSNAP1Q9BPW8 284 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 CDADC1Q9BWV3 514 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 ASPNQ9BXN1 380 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 CCDC90BQ9GZT6 254 aa5.4□□□□□ -1.55
PTPRD-206ENST00000397617 HIVEP2P31629 2446 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 TRBV4-1A0A0J9YWV2 114 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SURF4O15260 269 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 GIMD1P0DJR0 217 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 GAS1P54826 345 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 NIPAL3Q6P499 406 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 C11orf88Q6PI97 169 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 C16orf52Q8NHV5 167 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 MYLIPQ8WY64 445 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 C16orf58Q96GQ5 468 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 MAP3K3Q99759 626 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SIT1Q9Y3P8 196 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 C9J4A7 227 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 H3BQ06 376 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 P2RX6O15547 441 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ZFAND5O76080 213 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 RORCP51449 518 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 EGR3Q06889 387 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 C18orf63Q68DL7 685 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 BICRALQ6AI39 1079 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SLC29A4Q7RTT9 530 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ATG4DQ86TL0 474 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SLC35F3Q8IY50 421 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SAP25Q8TEE9 199 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 METTL21AQ8WXB1 218 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 SLC6A18Q96N87 628 aa5.39□□□□□ -1.55
PTPRD-206ENST00000397617 ACTR6Q9GZN1 396 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms