RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 OPN3Q9H1Y3 402 aaPredicted RBP3.04□□□□□ -1.92
CUBN-201ENST00000377823 EXO5Q9H790 373 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 WDR76Q9H967 626 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 COG4Q9H9E3 785 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 GALPQ9UBC7 116 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 SLC2A6Q9UGQ3 507 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 ZNF107Q9UII5 783 aaPredicted RBP3.04□□□□□ -1.92
CUBN-201ENST00000377823 DDX19BQ9UMR2 479 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 B9D1Q9UPM9 204 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 RNF6Q9Y252 685 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 CFL2Q9Y281 166 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 NAALAD2Q9Y3Q0 740 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 SPACA6W5XKT8 324 aa3.04□□□□□ -1.92
CUBN-201ENST00000377823 COL2A1P02458 1487 aaPredicted RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 USP6P35125 1406 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 FRMPD4Q14CM0 1322 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 CCDC171Q6TFL3 1326 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 C15orf38-AP3S2A0A0A6YYH1 394 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GOLGA8QA0A0J9YX86 632 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 LOC100506127A0A0U1RQW1 187 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 C1orf232A0A0U1RR37 186 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 A0A1W2PQ72 361 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GOLGA8OA6NCC3 632 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ZSCAN5BA6NJL1 495 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ERI2A8K979 691 aaKnown RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 GOLGA8NF8WBI6 632 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GOLGA8RI6L899 631 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 HIP1O00291 1037 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ZW10O43264 779 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GPAA1O43292 621 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 JAK2O60674 1132 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ATP5HO75947 161 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 AGTP01019 485 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 APOA1P02647 267 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ASNSP08243 561 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GCFC2P16383 781 aaKnown RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 U2AF2P26368 475 aaKnown RBP eCLIP3.03□□□□□ -1.92
CUBN-201ENST00000377823 PTBP1P26599 531 aaKnown RBP eCLIP3.03□□□□□ -1.92
CUBN-201ENST00000377823 DLSTP36957 453 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 SPAM1P38567 509 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 MAGEA1P43355 309 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 CBX5P45973 191 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 SLC25A1P53007 311 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 CXCL6P80162 114 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 OTUD4Q01804 1114 aaKnown RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 CHIT1Q13231 466 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 PLD1Q13393 1074 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 CHRNA6Q15825 494 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 USF2Q15853 346 aaPredicted RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 ZNF239Q16600 458 aaKnown RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 AANATQ16613 207 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 CYP51A1Q16850 503 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TTMPQ5BVD1 217 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 LIN9Q5TKA1 542 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 MARC1Q5VT66 337 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ZNF57Q68EA5 555 aaPredicted RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 ASPHD2Q6ICH7 369 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 SULT1C3Q6IMI6 304 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 SCYL2Q6P3W7 929 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 BLOC1S2Q6QNY1 142 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 CBLN3Q6UW01 205 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 CYS1Q717R9 158 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 LRRC70Q7Z2Q7 622 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 HSD11B1LQ7Z5J1 315 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TMCO2Q7Z6W1 182 aaPredicted RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 C10orf67Q8IYJ2 551 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 MCOLN2Q8IZK6 566 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TTC5Q8N0Z6 440 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ZNF321PQ8N8H1 164 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 ZNF565Q8N9K5 539 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 OR5AU1Q8NGC0 362 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 PAQR8Q8TEZ7 354 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 DNAJA4Q8WW22 397 aaPredicted RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 GTSF1Q8WW33 167 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 RAB7BQ96AH8 199 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TRNT1Q96Q11 434 aaKnown RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 OR5M11Q96RB7 305 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GPA33Q99795 319 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TMEM121Q9BTD3 319 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TRIM62Q9BVG3 475 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TM2D1Q9BX74 207 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 PKIBQ9C010 78 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 HDHD2Q9H0R4 259 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GORASP2Q9H8Y8 452 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 RRAGDQ9NQL2 400 aaPredicted RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 BATF3Q9NR55 127 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 KLHL28Q9NXS3 571 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 TMOD2Q9NZR1 351 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 STX18Q9P2W9 335 aaKnown RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 ABCD2Q9UBJ2 740 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 SNX6Q9UNH7 406 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 GMPPBQ9Y5P6 360 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 MAD1L1Q9Y6D9 718 aa3.03□□□□□ -1.92
CUBN-201ENST00000377823 RIMS1Q86UR5 1692 aaKnown RBP3.03□□□□□ -1.92
CUBN-201ENST00000377823 PTPRGP23470 1445 aa3.02□□□□□ -1.93
CUBN-201ENST00000377823 ZBED9Q6R2W3 1325 aa3.02□□□□□ -1.93
CUBN-201ENST00000377823 SH3TC1Q8TE82 1336 aa3.02□□□□□ -1.93
CUBN-201ENST00000377823 HEATR9A2RTY3 570 aa3.02□□□□□ -1.93
CUBN-201ENST00000377823 FAM74A7A6NL05 159 aa3.02□□□□□ -1.93
CUBN-201ENST00000377823 SPECC1L-ADORA2AF8WAN1 911 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms