RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 UMODP07911 640 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 PGCP20142 388 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ZNF117Q03924 483 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 CRYZQ08257 329 aaKnown RBP16.31■□□□□ 0.2
RAB39A-201ENST00000320578 RAB40BQ12829 278 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 EIF3IQ13347 325 aaKnown RBP16.31■□□□□ 0.2
RAB39A-201ENST00000320578 PCOLCEQ15113 449 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 EXT1Q16394 746 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ISXQ2M1V0 245 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 CCDC81Q6ZN84 652 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ZNF367Q7RTV3 350 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 OAFQ86UD1 273 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ANKK1Q8NFD2 765 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 HGDQ93099 445 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 FUNDC2Q9BWH2 189 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 WARS2Q9UGM6 360 aaKnown RBP16.31■□□□□ 0.2
RAB39A-201ENST00000320578 PCDHGA3Q9Y5H0 932 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 B3GALT1Q9Y5Z6 326 aa16.31■□□□□ 0.2
RAB39A-201ENST00000320578 ELOA3DA6NLF2 546 aaPredicted RBP16.3■□□□□ 0.2
RAB39A-201ENST00000320578 CDC40O60508 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
RAB39A-201ENST00000320578 LRP3O75074 770 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 TMED10P49755 219 aaKnown RBP16.3■□□□□ 0.2
RAB39A-201ENST00000320578 P2RX1P51575 399 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 FHL1Q13642 323 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 ELOA3BQ3SY89 546 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 ANKDD1AQ495B1 522 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 NXNL2Q5VZ03 156 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 RAB11FIP2Q7L804 512 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 MARCH3Q86UD3 253 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 TMCO5AQ8N6Q1 288 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 ELOA3Q8NG57 546 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 PMEPA1Q969W9 287 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 RTN4RQ9BZR6 473 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 FGF20Q9NP95 211 aaPredicted RBP16.3■□□□□ 0.2
RAB39A-201ENST00000320578 MYOTQ9UBF9 498 aa16.3■□□□□ 0.2
RAB39A-201ENST00000320578 DIMT1Q9UNQ2 313 aaKnown RBP16.3■□□□□ 0.2
RAB39A-201ENST00000320578 IGHV1-45A0A0A0MS14 117 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 FAM86C2PA6NEL3 165 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 PRR33A8MZF0 331 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 ADAM10O14672 748 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 HCRTR2O43614 444 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 AHCYL1O43865 530 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 GABARAPO95166 117 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 RAB40ALP0C0E4 278 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 CDK4P11802 303 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 PSMB9P28065 219 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 SLC6A6P31641 620 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 SUMO3P55854 103 aaPredicted RBP16.29■□□□□ 0.2
RAB39A-201ENST00000320578 TMED1Q13445 227 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 CBFBQ13951 182 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 DESI1Q6ICB0 168 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 FAM199XQ6PEV8 388 aaPredicted RBP16.29■□□□□ 0.2
RAB39A-201ENST00000320578 GALNT6Q8NCL4 622 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 OR13C2Q8NGS9 318 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 M1APQ8TC57 530 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 IMMP1LQ96LU5 166 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 MESP1Q9BRJ9 268 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 SPRY4Q9C004 299 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 ZBTB20Q9HC78 741 aaPredicted RBP16.29■□□□□ 0.2
RAB39A-201ENST00000320578 CMC2Q9NRP2 79 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 PTRH2Q9Y3E5 179 aaKnown RBP16.29■□□□□ 0.2
RAB39A-201ENST00000320578 ZNF337Q9Y3M9 751 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 TTC28Q96AY4 2481 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 MUC3AQ02505 3323 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 IGKV1D-42A0A075B6H8 117 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 OR7A10O76100 309 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 STK17BO94768 372 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 DLGAP3O95886 979 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 LCKP06239 509 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 ADORA3P0DMS8 318 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 CCNA2P20248 432 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 PAX7P23759 505 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 CCR4P51679 360 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 DLX5P56178 289 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 GALNT15Q8N3T1 639 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 ZNF563Q8TA94 476 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 SLC22A8Q8TCC7 542 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 C8orf44Q96CB5 159 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 FAM117AQ9C073 453 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 NAA50Q9GZZ1 169 aaKnown RBP16.29■□□□□ 0.2
RAB39A-201ENST00000320578 MCCC2Q9HCC0 563 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 PADI1Q9ULC6 663 aa16.29■□□□□ 0.2
RAB39A-201ENST00000320578 GPR179Q6PRD1 2367 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 NDUFB2O95178 105 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 PEPDP12955 493 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 MST1P26927 711 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 PCSK6P29122 969 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 HTR1FP30939 366 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 ETV5P41161 510 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 GAS1P54826 345 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 FOXK2Q01167 660 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 CSRP2Q16527 193 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 C3orf38Q5JPI3 329 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 ARMC4Q5T2S8 1044 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 LYPD8Q6UX82 237 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 C6orf15Q6UXA7 325 aaPredicted RBP16.28■□□□□ 0.2
RAB39A-201ENST00000320578 SLC16A12Q6ZSM3 486 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 SLC46A3Q7Z3Q1 461 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 GID4Q8IVV7 300 aa16.28■□□□□ 0.2
RAB39A-201ENST00000320578 PROKR2Q8NFJ6 384 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms