RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 DNASE1L3Q13609 305 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 CRTC2Q53ET0 693 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 PHF19Q5T6S3 580 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 OR5M10Q6IEU7 315 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 TUBA1AQ71U36 451 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 MRGPREQ86SM8 312 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 ZSCAN1Q8NBB4 408 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 SLC37A3Q8NCC5 494 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 OR52E2Q8NGJ4 325 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF563Q8TA94 476 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF524Q96C55 264 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 SSR3Q9UNL2 185 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 NPIPB9F8W1W9 429 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 BLOC1S5-TXNDC5H3BN57 136 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 DDAH2O95865 285 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 IL12BP29460 328 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 S100A5P33763 92 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 CAV3P56539 151 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 KLBQ86Z14 1044 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 CENPSQ8N2Z9 138 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 MFSD4AQ8N468 514 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 TMEM99Q8N816 258 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 FAM98AQ8NCA5 519 aaKnown RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 NLGN4YQ8NFZ3 816 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 SPRYD4Q8WW59 207 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 VMP1Q96GC9 406 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 GTPBP2Q9BX10 602 aaKnown RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 HDHD5Q9BXW7 423 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 ISG20L2Q9H9L3 353 aaKnown RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 APMAPQ9HDC9 416 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 QPCTLQ9NXS2 382 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 CAB39Q9Y376 341 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 C2orf72A6NCS6 295 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 MAGEB4O15481 346 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 HCRTR2O43614 444 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 SCO2O43819 266 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 HCN1O60741 890 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 CDRT1O95170 752 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 CRYBB2P43320 205 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 HCCSP53701 268 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 MLLT11Q13015 90 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 C3orf38Q5JPI3 329 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 NXNL2Q5VZ03 156 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 TMPRSS11FQ6ZWK6 438 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 C1orf210Q8IVY1 113 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 C9orf40Q8IXQ3 194 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 PSD4Q8NDX1 1056 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 BRIX1Q8TDN6 353 aaKnown RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 ZNF721Q8TF20 911 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 PTP4A1Q93096 173 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 LCORQ96JN0 433 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 WDR12Q9GZL7 423 aaKnown RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 MKKSQ9NPJ1 570 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 UBQLN4Q9NRR5 601 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 IER3IP1Q9Y5U9 82 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 BLACEA4D250 179 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 ELOA3DA6NLF2 546 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 C4orf47A7E2U8 309 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 TBX1O43435 398 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 GTF2E2P29084 291 aaKnown RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 SOX6P35712 828 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 ELOA3BQ3SY89 546 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 CCDC157Q569K6 752 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 SLC25A30Q5SVS4 291 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 MARCH3Q86UD3 253 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 ELOA3Q8NG57 546 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 EDAQ92838 391 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 MCCC2Q9HCC0 563 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 TMEM5Q9Y2B1 443 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 CACNA1HO95180 2353 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 ASPMQ8IZT6 3477 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 RIIAD1A6NNX1 92 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 FAM171A2A8MVW0 826 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 SOX30O94993 753 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 OCM2P0CE71 109 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 OCMP0CE72 109 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 UBL4AP11441 157 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 RGS21Q2M5E4 152 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 PMS2CLQ68D20 193 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 STT3BQ8TCJ2 826 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 PMEPA1Q969W9 287 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 OR1F2PQ96R84 312 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 STUB1Q9UNE7 303 aa16.45■□□□□ 0.22
CAPN1-201ENST00000279247 MN1Q10571 1320 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-201ENST00000279247 MCIDASD6RGH6 385 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 CALRP27797 417 aaKnown RBP16.44■□□□□ 0.22
CAPN1-201ENST00000279247 HTR1FP30939 366 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 UGT2B10P36537 528 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 PPICP45877 212 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 ELAVL1Q15717 326 aaKnown RBP16.44■□□□□ 0.22
CAPN1-201ENST00000279247 NIPAL3Q6P499 406 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 GRAMD2AQ8IUY3 354 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 LNX2Q8N448 690 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 C3orf49Q96BT1 292 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 PELOQ9BRX2 385 aaKnown RBP16.44■□□□□ 0.22
CAPN1-201ENST00000279247 SLC22A11Q9NSA0 550 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 NDUFB11Q9NX14 153 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 COPS7AQ9UBW8 275 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 MMACHCQ9Y4U1 282 aa16.44■□□□□ 0.22
CAPN1-201ENST00000279247 PLCXD2Q0VAA5 305 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms