RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 C12orf73Q69YU5 71 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 LYPD8Q6UX82 237 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 ZNF620Q6ZNG0 422 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 ATG4DQ86TL0 474 aaPredicted RBP17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 TMEM156Q8N614 296 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 IQCF1Q8N6M8 205 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 CLDN22Q8N7P3 220 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 ZNF540Q8NDQ6 660 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 OR10G3Q8NGC4 313 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 ADAMTS14Q8WXS8 1223 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 KIAA1143Q96AT1 154 aaPredicted RBP17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 Q96MT0 163 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 C12orf10Q9HB07 376 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 SLC25A19Q9HC21 320 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 VCX3AQ9NNX9 186 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 ZNF226Q9NYT6 803 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 SNX5Q9Y5X3 404 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 SPTBN4Q9H254 2564 aa17.09■□□□□ 0.33
TNFSF9-201ENST00000245817 ENO4A6NNW6 628 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 XPNPEP2O43895 674 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 HCN1O60741 890 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 F8A1P23610 371 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 CXCR1P25024 350 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 TACR3P29371 465 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 ID4P47928 161 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 SNAPC1Q16533 368 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 COL28A1Q2UY09 1125 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 CLEC12AQ5QGZ9 265 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 FCRLBQ6BAA4 426 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 LAIR2Q6ISS4 152 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 ZNF773Q6PK81 442 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 IL20RBQ6UXL0 311 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 MRGPREQ86SM8 312 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 OAFQ86UD1 273 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 MARCH9Q86YJ5 346 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 OR8J1Q8NGP2 316 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 FANK1Q8TC84 345 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 TMEM234Q8WY98 164 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 SGTBQ96EQ0 304 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 IP6K3Q96PC2 410 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 PLA2G12AQ9BZM1 189 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 CCNB1IP1Q9NPC3 277 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 PPP4R1LQ9P1A2 415 aa17.08■□□□□ 0.32
TNFSF9-201ENST00000245817 A6NHS1 94 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 CDC40O60508 579 aaKnown RBP eCLIP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 WBP4O75554 376 aaKnown RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SERPINA7P05543 415 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 TFAP2AP05549 437 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 MSX1P28360 303 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SUMO3P55854 103 aaPredicted RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 MLF1P58340 268 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 ZNF791Q3KP31 576 aaPredicted RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 OR2T33Q8NG76 320 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 APH1BQ8WW43 257 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 IPCEF1Q8WWN9 437 aaPredicted RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 NKD1Q969G9 470 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 IL4I1Q96RQ9 567 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 CCDC90BQ9GZT6 254 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 ADAM19Q9H013 955 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 GALNT9Q9HCQ5 603 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 WDR70Q9NW82 654 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 TAS2R10Q9NYW0 307 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SH3D21A4FU49 640 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 C2orf72A6NCS6 295 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 ANKUB1A6NFN9 424 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 M0R129 80 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 TERTO14746 1132 aaKnown RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SLC25A12O75746 678 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 PCYT1AP49585 367 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SNRPGP62308 76 aaKnown RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 IL10RAQ13651 578 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 QPRTQ15274 297 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SMN1Q16637 294 aaKnown RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 OR5M10Q6IEU7 315 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 CYP4Z2PQ8N1L4 340 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 TCEANCQ8N8B7 351 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 BRIX1Q8TDN6 353 aaKnown RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 GPR119Q8TDV5 335 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 PLEKHA8Q96JA3 519 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SAMD8Q96LT4 415 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 TMEM43Q9BTV4 400 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 OR52D1Q9H346 318 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 GPN2Q9H9Y4 310 aaPredicted RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 HPF1Q9NWY4 346 aa17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 MRPS18BQ9Y676 258 aaKnown RBP17.07■□□□□ 0.32
TNFSF9-201ENST00000245817 SDK2Q58EX2 2172 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 HMGN1P05114 100 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 GABRB1P18505 474 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 HTR3AP46098 478 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 POLR2HP52434 150 aaKnown RBP17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 CHAF1BQ13112 559 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 TOMM34Q15785 309 aaPredicted RBP17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 ACSM5Q6NUN0 579 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 SMARCD3Q6STE5 483 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 CCDC103Q8IW40 242 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 C10orf53Q8N6V4 93 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 OR13C2Q8NGS9 318 aa17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 SECISBP2Q96T21 854 aaKnown RBP17.06■□□□□ 0.32
TNFSF9-201ENST00000245817 POLDIP3Q9BY77 421 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms