RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 OR2V1Q8NHB1 315 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 WDR60Q8WVS4 1066 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 ARL5BQ96KC2 179 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 ELAC2Q9BQ52 826 aaKnown RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 CTPS2Q9NRF8 586 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF443Q9Y2A4 671 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-201ENST00000230480 SLC35A3Q9Y2D2 325 aa12.29□□□□□ -0.44
VEGFA-201ENST00000230480 A0A1W2PNR3 127 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 SLC22A20A6NK97 555 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF814B7Z6K7 855 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 FAAHO00519 579 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 SNX3O60493 162 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 IL18BPO95998 194 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 THBS1P07996 1170 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 PABPC4LP0CB38 370 aaKnown RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 TMIGD3P0DMS9 266 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 BMP5P22003 454 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ELK4P28324 431 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ADSLP30566 484 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 NTF4P34130 210 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 OPRM1P35372 400 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 EIF1P41567 113 aaKnown RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 IDH2P48735 452 aaKnown RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 CRISP3P54108 245 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 KRTAP10-9P60411 292 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 HOXC5Q00444 222 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 CDK6Q00534 326 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 CBFBQ13951 182 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 GCNT6Q5T4J0 391 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 RNF220Q5VTB9 566 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 REP15Q6BDI9 236 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF474Q6S9Z5 364 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 C22orf34Q6ZV56 151 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ESPNLQ6ZVH7 1005 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 TSPYL5Q86VY4 417 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 DMRTC2Q8IXT2 367 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 CMIPQ8IY22 773 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 MEIOBQ8N635 442 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 POU5F2Q8N7G0 328 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 GPR32P1Q8NGA4 272 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 OR4D11Q8NGI4 311 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ROBO4Q8WZ75 1007 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ST8SIA1Q92185 356 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 OSTF1Q92882 214 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 KLHL15Q96M94 604 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF583Q96ND8 569 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 SPOCK3Q9BQ16 436 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 GPATCH1Q9BRR8 931 aaKnown RBP12.28□□□□□ -0.44
VEGFA-201ENST00000230480 SPATA9Q9BWV2 254 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 HHATLQ9HCP6 504 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 KCNJ16Q9NPI9 418 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 OSGIN1Q9UJX0 560 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 ZNF175Q9Y473 711 aa12.28□□□□□ -0.44
VEGFA-201ENST00000230480 MYO9AB2RTY4 2548 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 ZC3H12DA2A288 527 aaKnown RBP12.27□□□□□ -0.45
VEGFA-201ENST00000230480 RAMP1O60894 148 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 MFN2O95140 757 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 NUDT14O95848 222 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 IL2RAP01589 272 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 ETS2P15036 469 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 ENPP1P22413 925 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 SLC6A2P23975 617 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 EDNRAP25101 427 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 HTR2AP28223 471 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 SFTPDP35247 375 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 EIF1AXP47813 144 aaKnown RBP12.27□□□□□ -0.45
VEGFA-201ENST00000230480 ANXA11P50995 505 aaKnown RBP12.27□□□□□ -0.45
VEGFA-201ENST00000230480 CCR4P51679 360 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 NFYCQ13952 458 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 SLC25A35Q3KQZ1 300 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 COQ5Q5HYK3 327 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 SERPINA11Q86U17 422 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 MTDHQ86UE4 582 aaKnown RBP12.27□□□□□ -0.45
VEGFA-201ENST00000230480 TMCO5AQ8N6Q1 288 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 LRRC58Q96CX6 371 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 TM9SF2Q99805 663 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 OR11A1Q9GZK7 315 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.27□□□□□ -0.45
VEGFA-201ENST00000230480 CCDC168Q8NDH2 2452 aa12.27□□□□□ -0.45
VEGFA-201ENST00000230480 CADP27708 2225 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 TMEM72A0PK05 275 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 A8MXE2 369 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 ANGPT2O15123 496 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 SMAD9O15198 467 aaKnown RBP12.26□□□□□ -0.45
VEGFA-201ENST00000230480 IMPDH2P12268 514 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 IL7RP16871 459 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 PGCP20142 388 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 GCKP35557 465 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 MERTKQ12866 999 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 SCARB2Q14108 478 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.452e-10■■■□□ 18
VEGFA-201ENST00000230480 ZNF239Q16600 458 aaKnown RBP12.26□□□□□ -0.45
VEGFA-201ENST00000230480 DUSP7Q16829 419 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 TRMT5Q32P41 509 aaKnown RBP12.26□□□□□ -0.45
VEGFA-201ENST00000230480 HBMQ6B0K9 141 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 REEP3Q6NUK4 255 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 DHRS4L2Q6PKH6 230 aa12.26□□□□□ -0.45
VEGFA-201ENST00000230480 SPATA21Q7Z572 469 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms