RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Raet1eQ9CZQ6 251 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 NsdhlQ9R1J0 362 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 H2afb1S4R1E0 115 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Rpl7a-ps5A0A140T8L3 268 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 TprnA2AI08 749 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm14085A2AWR5 660 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Amd2D3Z6H8 334 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ces2gE9PV38 560 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Cldn34aG3UW52 211 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 H2al1oL7MU04 110 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm7970L7N271 213 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm7980L7N471 213 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Nme6O88425 189 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ntrk2P15209 821 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Acp2P24638 423 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Nr2f6P43136 390 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Fabp5Q05816 135 aaKnown RBP9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tamm41Q3TUH1 337 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 TfptQ3U1J1 259 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Wdr20Q3UWE6 569 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Spire1Q52KF3 598 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Scgb2b2Q6UGQ3 114 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gorasp2Q99JX3 451 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Nkiras2Q9CR56 191 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 CalyQ9DCA7 226 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Sorcs2Q9EPR5 1159 aa9.12□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Vmn2r110E9PWD5 858 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr574F8VQ18 346 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Vmn1r14H3BJ46 303 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tcf3P15806 651 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Wnt11P48615 354 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Slc12a3P59158 1002 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 MakQ04859 622 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 AmbpQ07456 349 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Grxcr1Q50H32 290 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gpr39Q5U431 456 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Slc30a1Q60738 503 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 MertkQ60805 994 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Rgp1Q8BHT7 391 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Slc43a1Q8BSM7 564 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Slc25a21Q8BZ09 298 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 A730049H05RikQ8C940 139 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr164Q8VF87 315 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr160Q8VGE3 309 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Odf4Q8VI88 290 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Mat1aQ91X83 396 aaKnown RBP9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Cts3Q91ZD5 332 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Lypd2Q9DD23 127 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Slc7a7Q9Z1K8 510 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Trbv21A0A0A6YX06 97 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Igkv16-104A0A0B4J1I1 116 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Dcst2A0A140LIJ0 701 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Slc37a4A0A1L1SUI3 450 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Zfp282E9PVC2 666 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 H2-ObO35424 271 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 PnpP23492 289 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Sstr2P30875 369 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Sult2a1P52843 285 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 SctQ08535 133 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 FcamrQ2TB54 535 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Xkr7Q5GH64 580 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Taar7bQ5QD11 358 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Adh7Q64437 374 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Znf728Q6P5C7 752 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ranbp3lQ6PDH4 491 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr645Q7TRQ1 315 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gstm7Q80W21 218 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Pomgnt2Q8BW41 605 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Hpf1Q8CFE2 346 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Mill2Q8HWE5 355 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Cdc73Q8JZM7 531 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tor2aQ8R1J9 321 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Hbp1Q8R316 516 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr868Q8VFI8 309 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Pcdhb16Q91Y03 802 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Hemk1Q921L7 340 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Mrpl15Q9CPR5 295 aaKnown RBP9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Steap1Q9CWR7 339 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Snapc3Q9D2C9 407 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 DlstQ9D2G2 454 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ift22Q9DAI2 185 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tssc4Q9JHE7 317 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Syt8Q9R0N6 395 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ptrhd1D3Z4S3 140 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr730E9Q8M3 318 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Bcl2a1dO55179 172 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 P03987 398 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tead1P30051 426 aaKnown RBP9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gnb5P62881 395 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Pak6Q3ULB5 682 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr12Q60894 333 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Krba1Q6NXZ1 1043 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Dlec1Q8BLA1 635 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Slc1a7Q8JZR4 559 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 NifkQ91VE6 317 aaKnown RBP9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 WacQ924H7 646 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 HhatlQ9D1G3 503 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Lcn9Q9D267 178 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Dgat2Q9DCV3 388 aa9.11□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tmem27Q9ESG4 222 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms