RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 AQP6Q13520 282 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 CTF1Q16619 201 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 RNF113BQ8IZP6 322 aaKnown RBP8.37□□□□□ -1.07
VCL-206ENST00000623461 OR51D1Q8NGF3 324 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 PCYT2Q99447 389 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 SLC6A20Q9NP91 592 aa8.37□□□□□ -1.07
VCL-206ENST00000623461 CRTAPO75718 401 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 PRKAR1BP31321 381 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 GPR50Q13585 617 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 UQCC3Q6UW78 93 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 GPRIN1Q7Z2K8 1008 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 ADGRG3Q86Y34 549 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 ZNF695Q8IW36 515 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 RIMKLAQ8IXN7 391 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PLA2G15Q8NCC3 412 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PLPP5Q8NEB5 264 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 OR6M1Q8NGM8 313 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 SAMD10Q9BYL1 202 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 LIN7BQ9HAP6 207 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 GPATCH2Q9NW75 528 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 J3KTA2 159 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 KNG1P01042 644 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CD1EP15812 388 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CCR6P51684 374 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 EMP3P54852 163 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 RAB1AP62820 205 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 P2RY14Q15391 338 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CORO6Q6QEF8 472 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 SKA3Q8IX90 412 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 HMGB4Q8WW32 186 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 BTBD2Q9BX70 525 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 OR52D1Q9H346 318 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 TAS2R16Q9NYV7 291 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 ZNF175Q9Y473 711 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 TRBV4-1A0A0J9YWV2 114 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 A0A1B0GTW7 788 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 C11orf98E9PRG8 122 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 HEXBP07686 556 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 SOHLH1Q5JUK2 328 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 B3GNT9Q6UX72 402 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 BMFQ96LC9 184 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 DDOQ99489 341 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CROCCQ5TZA2 2017 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 C5P01031 1676 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 A0A0G2JLL6 359 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 AIPO00170 330 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 NFKBIEO00221 500 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 DDNO94850 711 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 MT-CO2P00403 227 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 IFNGR1P15260 489 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 ZNF8P17098 575 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 SHC1P29353 583 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CTXN1P60606 82 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 RPS15AP62244 130 aaKnown RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 MBTPS1Q14703 1052 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PRRT2Q7Z6L0 340 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 SH3RF2Q8TEC5 729 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 UBTD2Q8WUN7 234 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 ACKR4Q9NPB9 350 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 YIPF1Q9Y548 306 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PUS1Q9Y606 427 aaKnown RBP eCLIP8.36□□□□□ -1.07
VCL-206ENST00000623461 YKT6O15498 198 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PIP5K1CO60331 668 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 GPR32O75388 356 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CSF3P09919 207 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CLEC2LP0C7M8 214 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 SPNP16150 400 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 HLA-FP30511 346 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 RPL23AP62750 156 aaKnown RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 TNFRSF17Q02223 184 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PIP5KL1Q5T9C9 394 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 C17orf107Q6ZR85 190 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 KANSL1Q7Z3B3 1105 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CCDC190Q86UF4 302 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 OR6N1Q8NGY5 312 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 LGALS14Q8TCE9 139 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PGAM5Q96HS1 289 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PLSCR3Q9NRY6 295 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 CFAP20Q9Y6A4 193 aaKnown RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 GABARAPH6UMI1 98 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 PRSS56P0CW18 603 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 MLIPQ5VWP3 458 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 HMGN2P46Q86SG4 172 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 NAA40Q86UY6 237 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 OR6F1Q8NGZ6 308 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 NANPQ8TBE9 248 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 NINJ1Q92982 152 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 ZIC5Q96T25 663 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 NMNAT2Q9BZQ4 307 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 MCOLN1Q9GZU1 580 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 POLMQ9NP87 494 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 C2orf42Q9NWW7 574 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 IL20RAQ9UHF4 553 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 GMEB2Q9UKD1 530 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 A0A087WZY1 265 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 IGKV6-21A0A0C4DH24 114 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 H7C1Q1 480 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 AKR7A2O43488 359 aa8.36□□□□□ -1.07
VCL-206ENST00000623461 USP2O75604 605 aaPredicted RBP8.36□□□□□ -1.07
VCL-206ENST00000623461 SCO1O75880 301 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms