RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 STX4Q12846 297 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 GPR50Q13585 617 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 SF3B4Q15427 424 aaKnown RBP eCLIP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 AGAP6Q5VW22 663 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 CD200R1LQ6Q8B3 271 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 KIRREL2Q6UWL6 708 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 SMRP1Q8NCR6 262 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR4C3Q8NH37 302 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR4K13Q8NH42 304 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 RIT1Q92963 219 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 AGAP4Q96P64 663 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 DNAJB12Q9NXW2 375 aaKnown RBP12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZMIZ1Q9ULJ6 1067 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 CABIN1Q9Y6J0 2220 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 COL4A2P08572 1712 aa12.99□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A0B4J293 547 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 DAPL1A0PJW8 107 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 CCDC182A6NF36 153 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 J3QLW9 94 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 SDC3O75056 442 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 HMGN1P05114 100 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF19P17023 458 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 BMP8BP34820 402 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 HTR3AP46098 478 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 KCNAB1Q14722 419 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ALG10BQ5I7T1 473 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 NKAIN2Q5VXU1 208 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ARMC6Q6NXE6 501 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF517Q6ZMY9 492 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 BMP8AQ7Z5Y6 402 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 OAFQ86UD1 273 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ACBD7Q8N6N7 88 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF321PQ8N8H1 164 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 C19orf47Q8N9M1 422 aaKnown RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZPLD1Q8TCW7 415 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 CAPSLQ8WWF8 208 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 NR4A3Q92570 626 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZMYND19Q96E35 227 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 TEAD3Q99594 435 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 TEX12Q9BXU0 123 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 CLEC4AQ9UMR7 237 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ERVK-19Q9WJR5 959 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 CACNA1CQ13936 2221 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ARID1BQ8NFD5 2236 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A0B4J2E0 115 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A1B0GX12 115 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 PRR23D1E9PI22 279 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 GTPBP1O00178 669 aaKnown RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 RNF13O43567 381 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 DYRK3O43781 588 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 NKX2-2O95096 273 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 PRR23D2P0DMB1 279 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 FHL1Q13642 323 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 RAB30Q15771 203 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 IDNKQ5T6J7 187 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 GARNL3Q5VVW2 1013 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 KIAA0895LQ68EN5 471 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 UBQLNLQ8IYU4 475 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 LNX2Q8N448 690 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR5J2Q8NH18 312 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 EFHD2Q96C19 240 aaPredicted RBP12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 ORAI1Q96D31 301 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 TMCO6Q96DC7 493 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 C4orf36Q96KX1 117 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 STACQ99469 402 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 HOXD1Q9GZZ0 328 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 POMT2Q9UKY4 750 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 SATB2Q9UPW6 733 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 CLDN16Q9Y5I7 305 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 HS3ST3A1Q9Y663 406 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
PCDHGA3-202ENST00000612467 A8MUA0 341 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 PSMD9O00233 223 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 WNT1P04628 370 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 KIR2DL3P43628 341 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 IL18Q14116 193 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ARHGEF39Q8N4T4 335 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF655Q8N720 491 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ZNF524Q96C55 264 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 RBM18Q96H35 190 aaKnown RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 TMEM27Q9HBJ8 222 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 MCCC2Q9HCC0 563 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 ENTPD2Q9Y5L3 495 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 A0A0B4J203 849 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 IRGMA1A4Y4 181 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 PAHP00439 452 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 SLC35E2P0CK97 266 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 SLC2A2P11168 524 aaPredicted RBP12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 FOXL2P58012 376 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 TP53I3Q53FA7 332 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR52E2Q8NGJ4 325 aa12.97□□□□□ -0.33
PCDHGA3-202ENST00000612467 OR5M3Q8NGP4 307 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms