RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CD46P15529 392 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 IFNA8P32881 189 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 SLC6A8P48029 635 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 C17orf67Q0P5P2 114 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 SKP2Q13309 424 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 RCN1Q15293 331 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 NDUFAF6Q330K2 333 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 BICRALQ6AI39 1079 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 APOOLQ6UXV4 268 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 CXXC5Q7LFL8 322 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 COMTD1Q86VU5 262 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF808Q8N4W9 903 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 FAM71CQ8NEG0 241 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 RNF138Q8WVD3 245 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 CNOT9Q92600 299 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 SH3YL1Q96HL8 342 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 CHID1Q9BWS9 393 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 ANGPTL4Q9BY76 406 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 LAT2Q9GZY6 243 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 S100A14Q9HCY8 104 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 SH2D2AQ9NP31 389 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 IL1RAPQ9NPH3 570 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 EXOSC3Q9NQT5 275 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 ARMC1Q9NVT9 282 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 DNAJB12Q9NXW2 375 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 PLA2G3Q9NZ20 509 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 TESQ9UGI8 421 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 CNOT11Q9UKZ1 510 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 CARD8Q9Y2G2 431 aa10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 RPH3AQ9Y2J0 694 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 KLF13Q9Y2Y9 288 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-213ENST00000597325 ANKRD33BA6NCL7 494 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 TMEM229AB2RXF0 380 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 H0Y3Z8 333 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 C19orf84I3L1E1 186 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 EPPINO95925 133 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 SEMG1P04279 462 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 GKN3PP0CG01 181 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 FASP25445 335 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 SUMO3P55854 103 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 COPZ1P61923 177 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 VLDLRP98155 873 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF117Q03924 483 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 SPINK14Q6IE38 97 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 PLEKHM3Q6ZWE6 761 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 MDGA2Q7Z553 956 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 MRGPRGQ86SM5 289 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 LACC1Q8IV20 430 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 ZADH2Q8N4Q0 377 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 PAPD5Q8NDF8 572 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 TOR1AIP2Q8NFQ8 470 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 OR4K17Q8NGC6 315 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 OR6T1Q8NGN1 323 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 B4GALNT2Q8NHY0 566 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 DUSP19Q8WTR2 217 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 NR4A3Q92570 626 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 HAS2Q92819 552 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 SLCO4A1Q96BD0 722 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 DTNBP1Q96EV8 351 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 CCDC120Q96HB5 630 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 JSRP1Q96MG2 331 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 SIGLEC12Q96PQ1 595 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF347Q96SE7 839 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 ZNF559Q9BR84 538 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 CXXC4Q9H2H0 198 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 RPS6KB2Q9UBS0 482 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 CHST2Q9Y4C5 530 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 ENPP4Q9Y6X5 453 aa10.96□□□□□ -0.65
SHKBP1-213ENST00000597325 C2orf72A6NCS6 295 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 G3V3Y1 287 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 GNGT2O14610 69 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 ADAMDEC1O15204 470 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 GMFGO60234 142 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 FMO6PO60774 539 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 BCAS1O75363 584 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 DEAF1O75398 565 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 TIPRLO75663 272 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 NEURL1O76050 574 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 BAG2O95816 211 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 CST1P01037 141 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 LINGO3P0C6S8 592 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 PGCP20142 388 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 KLK2P20151 261 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 MSX1P28360 303 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 RYKP34925 604 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 PTGDSP41222 190 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 MAGEA2P43356 314 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 P2RX1P51575 399 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 GAS1P54826 345 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 TAS2R41P59536 307 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 SPIBQ01892 262 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 TLE4Q04727 773 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 LTBQ06643 244 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 EPS8Q12929 822 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 CBFBQ13951 182 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 IGFL2Q6UWQ7 119 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 TMEM178AQ8NBL3 297 aa10.95□□□□□ -0.66
SHKBP1-213ENST00000597325 MDS2Q8NDY4 140 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms