RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ZNF700Q9H0M5 742 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 ADNPQ9H2P0 1102 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 TMEM27Q9HBJ8 222 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 UBQLN4Q9NRR5 601 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 RNF6Q9Y252 685 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 CARD8Q9Y2G2 431 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 PCDHGA6Q9Y5G7 932 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 HS3ST3B1Q9Y662 390 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 COL12A1Q99715 3063 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 DPPA5A6NC42 116 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 TMEM200CA6NKL6 621 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ZAR1LA6NP61 321 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 H3BN98 237 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 MASP2O00187 686 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 SLC1A7O00341 560 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 SOCS6O14544 535 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 GMFGO60234 142 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 PPM1BO75688 479 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ANGPTL1O95841 491 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 SFTPCP11686 197 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 HPGDP15428 266 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 TCN2P20062 427 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 LCN1P31025 176 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 OTX2P32243 289 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 IDH2P48735 452 aaKnown RBP9.31□□□□□ -0.92
APOC1-201ENST00000586638 NRG3P56975 720 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 FBXW4P57775 412 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ISL1P61371 349 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ESRRGP62508 458 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ZNF117Q03924 483 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 EIF3IQ13347 325 aaKnown RBP9.31□□□□□ -0.92
APOC1-201ENST00000586638 TGIF1Q15583 401 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ZSWIM7Q19AV6 140 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 C6orf141Q5SZD1 244 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 C1orf94Q6P1W5 598 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ZNF613Q6PF04 617 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 MBOAT2Q6ZWT7 520 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 MARCH3Q86UD3 253 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ZNF440Q8IYI8 595 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ENTHD1Q8IYW4 607 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 POGLUT1Q8NBL1 392 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 OR8D4Q8NGM9 314 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 OR5M3Q8NGP4 307 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 FBLIM1Q8WUP2 373 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 APH1BQ8WW43 257 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 SGCDQ92629 289 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 HDAC2Q92769 488 aaKnown RBP9.31□□□□□ -0.92
APOC1-201ENST00000586638 EXTL1Q92935 676 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 UBE2FQ969M7 185 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 HRASLS5Q96KN8 279 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 NODALQ96S42 347 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 PLA2G12AQ9BZM1 189 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 TRIM2Q9C040 744 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 EGLN3Q9H6Z9 239 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 BATF3Q9NR55 127 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 RASSF1Q9NS23 344 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 RPS6KB2Q9UBS0 482 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 ENOPH1Q9UHY7 261 aa9.31□□□□□ -0.92
APOC1-201ENST00000586638 GTPBP1O00178 669 aaKnown RBP9.3□□□□□ -0.92
APOC1-201ENST00000586638 CHP2O43745 196 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 ZFAND5O76080 213 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 ITGB2P05107 769 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 NGFRP08138 427 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 FUT1P19526 365 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 MAKP20794 623 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 GSTM3P21266 225 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 EVI2BP34910 448 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 IFNGR2P38484 337 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 ST13P50502 369 aaKnown RBP9.3□□□□□ -0.92
APOC1-201ENST00000586638 RPS6KA3P51812 740 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 PNLIPRP2P54317 469 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 TSPAN31Q12999 210 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 CDK5R2Q13319 367 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 DNASE1L3Q13609 305 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 PTGES3Q15185 160 aaKnown RBP9.3□□□□□ -0.92
APOC1-201ENST00000586638 ALG10BQ5I7T1 473 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 RBM48Q5RL73 367 aaKnown RBP9.3□□□□□ -0.92
APOC1-201ENST00000586638 SLX4IPQ5VYV7 408 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 CBLN3Q6UW01 205 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 LYPD8Q6UX82 237 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 RRM2BQ7LG56 351 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 PPP1R32Q7Z5V6 425 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 P3H2Q8IVL5 708 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 OR8K3Q8NH51 312 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 TMEM239Q8WW34 195 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 OIT3Q8WWZ8 545 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 HGDQ93099 445 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 SLC35B4Q969S0 331 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 TP53INP1Q96A56 240 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 C3orf49Q96BT1 292 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 RHNO1Q9BSD3 238 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 TBL1XR1Q9BZK7 514 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 ZBTB20Q9HC78 741 aaPredicted RBP9.3□□□□□ -0.92
APOC1-201ENST00000586638 ZNF160Q9HCG1 818 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 KRCC1Q9NPI7 259 aaPredicted RBP9.3□□□□□ -0.92
APOC1-201ENST00000586638 EXOSC3Q9NQT5 275 aaKnown RBP9.3□□□□□ -0.92
APOC1-201ENST00000586638 ZNF226Q9NYT6 803 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 PADI1Q9ULC6 663 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 PCDHGA3Q9Y5H0 932 aa9.3□□□□□ -0.92
APOC1-201ENST00000586638 NPFFR2Q9Y5X5 522 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms