RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SLC2A12Q8TD20 617 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 TSLPQ969D9 159 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 ATP13A2Q9NQ11 1180 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 A8MUA0 341 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 SCDO00767 359 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 LRP3O75074 770 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 ATXN8OSP0DMR3 200 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 PTNP21246 168 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 PSMA1P25786 263 aaKnown RBP20.83■□□□□ 0.92
CCDC47-204ENST00000582252 OPRL1P41146 370 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 WNT4P56705 351 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 ARMC4Q5T2S8 1044 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 CXXC5Q7LFL8 322 aaKnown RBP20.83■□□□□ 0.92
CCDC47-204ENST00000582252 ZBTB46Q86UZ6 589 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 ATCAYQ86WG3 371 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 LNX2Q8N448 690 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 SLC15A4Q8N697 577 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 IFI44Q8TCB0 444 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 ATOH1Q92858 354 aaPredicted RBP20.83■□□□□ 0.92
CCDC47-204ENST00000582252 CLIP3Q96DZ5 547 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 SLIRPQ9GZT3 109 aaKnown RBP20.83■□□□□ 0.92
CCDC47-204ENST00000582252 MMP27Q9H306 513 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 COPS7AQ9UBW8 275 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 SIGLEC7Q9Y286 467 aa20.83■□□□□ 0.92
CCDC47-204ENST00000582252 HTR3EA5X5Y0 456 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 IGKV3-11P04433 115 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 ZGLP1P0C6A0 271 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 NSDHLQ15738 373 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 CLPPQ16740 277 aaPredicted RBP20.82■□□□□ 0.92
CCDC47-204ENST00000582252 KLHL26Q53HC5 615 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 HLA-DQA1Q5Y7H0 255 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 LINC00114Q6XXX2 140 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 TMCO5AQ8N6Q1 288 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 OR4C3Q8NH37 302 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 MCFD2Q8NI22 146 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 ZNF721Q8TF20 911 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 EDEM2Q9BV94 578 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 MEPEQ9NQ76 525 aaPredicted RBP20.82■□□□□ 0.92
CCDC47-204ENST00000582252 B3GNT3Q9Y2A9 372 aa20.82■□□□□ 0.92
CCDC47-204ENST00000582252 BHLHE40O14503 412 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 PPM1BO75688 479 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 LDOC1O95751 146 aaPredicted RBP20.81■□□□□ 0.92
CCDC47-204ENST00000582252 TBXA2RP21731 343 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 SOX6P35712 828 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 ETV5P41161 510 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 ETV1P50549 477 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 GAS1P54826 345 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 SPEM2Q0P670 501 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 TMED1Q13445 227 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 SSX1Q16384 188 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 ZNF404Q494X3 552 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 ARHGAP22Q7Z5H3 698 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 PSD4Q8NDX1 1056 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 OR6Q1Q8NGQ2 317 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 OR13C2Q8NGS9 318 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 EFHD2Q96C19 240 aaPredicted RBP20.81■□□□□ 0.92
CCDC47-204ENST00000582252 IFT27Q9BW83 186 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 LRRN3Q9H3W5 708 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 TMEM9BQ9NQ34 198 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 EXOSC3Q9NQT5 275 aaKnown RBP20.81■□□□□ 0.92
CCDC47-204ENST00000582252 NDUFB11Q9NX14 153 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 NCDNQ9UBB6 729 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 EXOGQ9Y2C4 368 aaKnown RBP20.81■□□□□ 0.92
CCDC47-204ENST00000582252 C2orf92A0A1B0GVN3 265 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 OR6C76A6NM76 312 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 CDX4O14627 284 aaPredicted RBP20.81■□□□□ 0.92
CCDC47-204ENST00000582252 DDAH2O95865 285 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 SLC6A6P31641 620 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 LIMK1P53667 647 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 PRAMEF17Q5VTA0 474 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 C1orf189Q5VU69 101 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 RHBDD2Q6NTF9 364 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 KIRREL2Q6UWL6 708 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 PRR23CQ6ZRP0 262 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 OAFQ86UD1 273 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 CACTIN-AS1Q8N1I8 211 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 RHBDD1Q8TEB9 315 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 DACH2Q96NX9 599 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 NXF5Q9H1B4 397 aaKnown RBP20.81■□□□□ 0.92
CCDC47-204ENST00000582252 AKIP1Q9NQ31 210 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 IL20RAQ9UHF4 553 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 STUB1Q9UNE7 303 aa20.81■□□□□ 0.92
CCDC47-204ENST00000582252 A0A1B0GVG6 124 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 HBQ1P09105 142 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 UBL4AP11441 157 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 PAICSP22234 425 aaKnown RBP20.8■□□□□ 0.92
CCDC47-204ENST00000582252 ATP6V1E1P36543 226 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 SLC9A3P48764 834 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 PSPHP78330 225 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 CCL7P80098 99 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 CRYZQ08257 329 aaKnown RBP20.8■□□□□ 0.92
CCDC47-204ENST00000582252 CSRP2Q16527 193 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 VWA2Q5GFL6 755 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 RTL4Q6ZR62 310 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 SLC29A4Q7RTT9 530 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 ZSCAN1Q8NBB4 408 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 PLPP5Q8NEB5 264 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 FAM71CQ8NEG0 241 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 OR4D9Q8NGE8 314 aa20.8■□□□□ 0.92
CCDC47-204ENST00000582252 CENPOQ9BU64 300 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms