RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 BPESC1Q9GZL8 116 aa8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 QRSL1Q9H0R6 528 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 RAB17Q9H0T7 212 aa8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 MID1IP1Q9NPA3 183 aa8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 TMEFF2Q9UIK5 374 aaPredicted RBP8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 WBP11Q9Y2W2 641 aaKnown RBP8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 ACTL7BQ9Y614 415 aa8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 KCNE3Q9Y6H6 103 aa8.86□□□□□ -0.99
NPLOC4-220ENST00000576940 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 LOC390937A0A1W2PQ73 354 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 ATP6V1G2-DDX39BF2Z307 99 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 NDUFS8O00217 210 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 SLU7O95391 586 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 ZNF23P17027 643 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 LCN1P31025 176 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 IL2RGP31785 369 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 SRP14P37108 136 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 DIO1P49895 249 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 SERPINB9P50453 376 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 PRKAA2P54646 552 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 PKNOX1P55347 436 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 PHC1P78364 1004 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 SLC25A3Q00325 362 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 LCP2Q13094 533 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 SELENBP1Q13228 472 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 KIAA0040Q15053 153 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 QPRTQ15274 297 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 TIGD2Q4W5G0 525 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 EXOSC6Q5RKV6 272 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 BHLHB9Q6PI77 547 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 TMPPEQ6ZT21 453 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 ZNF572Q7Z3I7 529 aaPredicted RBP8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 DCAKDQ8WVC6 231 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 APH1AQ96BI3 265 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 MS4A4EQ96PG1 132 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 TRMOQ9BU70 441 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 BTBD2Q9BX70 525 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 GSTO2Q9H4Y5 243 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 OCEL1Q9H607 264 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 ZDHHC18Q9NUE0 388 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 ASB6Q9NWX5 421 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 SH3BP4Q9P0V3 963 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 BAIAP2L1Q9UHR4 511 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 MOKQ9UQ07 419 aa8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 NOSIPQ9Y314 301 aaKnown RBP8.85□□□□□ -0.99
NPLOC4-220ENST00000576940 CCDC151A5D8V7 595 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 ZNF716A6NP11 495 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 SULT2B1O00204 365 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 SEC22BO75396 215 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 HMGN2P05204 90 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 ITGA5P08648 1049 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 ATP6V1C1P21283 382 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 ATP5F1P24539 256 aaPredicted RBP8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 CCR4P51679 360 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 LASP1Q14847 261 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 MLC1Q15049 377 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 SLC25A53Q5H9E4 307 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 CDC73Q6P1J9 531 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 ZCCHC12Q6PEW1 402 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 SYT10Q6XYQ8 523 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 IKBIPQ70UQ0 350 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 TRIM46Q7Z4K8 759 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 CCDC103Q8IW40 242 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 ZNF614Q8N883 585 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 OR5W2Q8NH69 310 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 CLHC1Q8NHS4 586 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 FAM76AQ8TAV0 307 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 FAM120BQ96EK7 910 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 FUT8Q9BYC5 575 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 BHLHE41Q9C0J9 482 aaPredicted RBP8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 HOXD1Q9GZZ0 328 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 CDC42EP4Q9H3Q1 356 aaKnown RBP8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 PIGUQ9H490 435 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 REEP4Q9H6H4 257 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 FKRPQ9H9S5 495 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 TNFRSF12AQ9NP84 129 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 TAS2R16Q9NYV7 291 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 CCL27Q9Y4X3 112 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 FKBP7Q9Y680 259 aa8.84□□□□□ -0.99
NPLOC4-220ENST00000576940 TRRAPQ9Y4A5 3859 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 IGKV3D-15A0A087WSY6 115 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 NPIPB8E9PQR5 432 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 H3BNH8 94 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 KLF11O14901 512 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 ZNF264O43296 627 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 MRPL33O75394 65 aaKnown RBP8.83□□□□□ -1
NPLOC4-220ENST00000576940 CYP7B1O75881 506 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 RSL1D1O76021 490 aaKnown RBP8.83□□□□□ -1
NPLOC4-220ENST00000576940 STAMBPO95630 424 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 HSPA4LO95757 839 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 CASQ1P31415 396 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 FRKP42685 505 aaPredicted RBP8.83□□□□□ -1
NPLOC4-220ENST00000576940 ATP12AP54707 1039 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 SUMO3P55854 103 aaPredicted RBP8.83□□□□□ -1
NPLOC4-220ENST00000576940 CBFBQ13951 182 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 PDK3Q15120 406 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 WHAMMP3Q1A5X7 153 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 OR7E24Q6IFN5 339 aa8.83□□□□□ -1
NPLOC4-220ENST00000576940 MTDHQ86UE4 582 aaKnown RBP8.83□□□□□ -1
NPLOC4-220ENST00000576940 TMCO5AQ8N6Q1 288 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms