RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 NCCRP1Q6ZVX7 275 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 SLC46A3Q7Z3Q1 461 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 CYP4Z2PQ8N1L4 340 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 TMCO5AQ8N6Q1 288 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 OR1N1Q8NGS0 311 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 VANGL1Q8TAA9 524 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 TEX47Q8TBZ9 253 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 DYNC2LI1Q8TCX1 351 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 ZNF675Q8TD23 568 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 CHPT1Q8WUD6 406 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 XAGE5Q8WWM1 108 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 PMM1Q92871 262 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 RERGQ96A58 199 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 C14orf79Q96F83 325 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 ARHGDIGQ99819 225 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 MND1Q9BWT6 205 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 POLDIP3Q9BY77 421 aaKnown RBP10.23□□□□□ -0.77
SHMT2-216ENST00000554975 MMP27Q9H306 513 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 SERHL2Q9H4I8 314 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 SLC25A19Q9HC21 320 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 MCCC2Q9HCC0 563 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 LYRM4Q9HD34 91 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 AKIP1Q9NQ31 210 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 ZNF226Q9NYT6 803 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 NTMQ9P121 344 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 SEC14L4Q9UDX3 406 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 FBXW2Q9UKT8 454 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 MKLN1Q9UL63 735 aa10.23□□□□□ -0.77
SHMT2-216ENST00000554975 JMJD1CQ15652 2540 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 PNMA8CA0A1B0GUJ8 204 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 A0A1W2PR48 441 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 PRAMEF25A6NGN4 478 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 H3BN98 237 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 J3KTA2 159 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 AP3D1O14617 1153 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 PROM1O43490 865 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CTSVO60911 334 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 HMGN2P05204 90 aaKnown RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CD99P14209 185 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CPN2P22792 545 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CD40LGP29965 261 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 GSSP48637 474 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 SMSP52788 366 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 LIM2P55344 173 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 COPZ1P61923 177 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ST3GAL3Q11203 375 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ST3GAL4Q11206 333 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 KRR1Q13601 381 aaKnown RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 GRM7Q14831 915 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 OCLNQ16625 522 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 SMN1Q16637 294 aaKnown RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 NKAIN1Q4KMZ8 207 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 SLC25A30Q5SVS4 291 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 PLAG1Q6DJT9 500 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 PGBD2Q6P3X8 592 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ZCCHC12Q6PEW1 402 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 XKRXQ6PP77 449 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CCDC103Q8IW40 242 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 PEX5LQ8IYB4 626 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 METTL27Q8N6F8 245 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 DRAXINQ8NBI3 349 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 NUP43Q8NFH3 380 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 PIGXQ8TBF5 258 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 GNPDA2Q8TDQ7 276 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ADAMTS15Q8TE58 950 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ADAMTS18Q8TE60 1221 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 GGHQ92820 318 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CNRIP1Q96F85 164 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 COX4I2Q96KJ9 171 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 SLC38A2Q96QD8 506 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 OR7D2Q96RA2 312 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ZFYVE21Q9BQ24 234 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 FUZQ9BT04 418 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 DCSTAMPQ9H295 470 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 GSX1Q9H4S2 264 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ARMC7Q9H6L4 198 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 SIAEQ9HAT2 523 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 POLE3Q9NRF9 147 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CUTCQ9NTM9 273 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 RLIMQ9NVW2 624 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 CES1P1Q9UKY3 287 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 ERGIC3Q9Y282 383 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 HS3ST3B1Q9Y662 390 aa10.22□□□□□ -0.77
SHMT2-216ENST00000554975 NSD1Q96L73 2696 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-216ENST00000554975 A0A087WV62 115 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 LOC105369274A0A096LPK9 316 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 A0A0G2JN53 185 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 LOC102723532A0A0G2JNH3 316 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 TRBV4-1A0A0J9YWV2 114 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 A0A1B0GVG6 124 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 A0A1B0GX78 115 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 CCRL2O00421 344 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 MYL12BO14950 172 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 SRPX2O60687 465 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OR5F1O95221 314 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 LCKP06239 509 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 THBS1P07996 1170 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 MMP11P24347 488 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 S100A5P33763 92 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OPRL1P41146 370 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms