RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RCN3Q96D15 328 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 ZFP3Q96NJ6 502 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 TRIB1Q96RU8 372 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 NPAS1Q99742 590 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 TRIM8Q9BZR9 551 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 NANOGQ9H9S0 305 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 PRDM4Q9UKN5 801 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 KLF2Q9Y5W3 355 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 CENPEQ02224 2701 aa10.56□□□□□ -0.72
TRAFD1-209ENST00000552896 LOC100653049A0A140TA62 436 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 KDM4EB2RXH2 506 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 SEC14L5O43304 696 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ADAM11O75078 769 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 DCTN3O75935 186 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 KRT34O76011 436 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 CLDN14O95500 239 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 CLDN1O95832 211 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 FAM107AO95990 144 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 PRDX6P30041 224 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 PRKAR1BP31321 381 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 CEACAM8P31997 349 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 PCGF2P35227 344 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 CLDN20P56880 219 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 PCBP3P57721 371 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 RPS3AP61247 264 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 EPS8Q12929 822 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ART3Q13508 389 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 CTU2Q2VPK5 515 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 RABL3Q5HYI8 236 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 HACD2Q6Y1H2 254 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ESPNLQ6ZVH7 1005 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 TREML1Q86YW5 311 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ZZZ3Q8IYH5 903 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ANKS4BQ8N8V4 417 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 SMPDL3BQ92485 455 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 WNT2BQ93097 391 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 SDCCAG3Q96C92 435 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 CMTM5Q96DZ9 223 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ADGRG7Q96K78 797 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF607Q96SK3 696 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 TM9SF2Q99805 663 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 SPATA5L1Q9BVQ7 753 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ACER3Q9NUN7 267 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 PAQR5Q9NXK6 330 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF232Q9UNY5 417 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 RNF6Q9Y252 685 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF175Q9Y473 711 aa10.55□□□□□ -0.72
TRAFD1-209ENST00000552896 ANKHD1Q8IWZ3 2542 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 A0A0G2JNJ9 132 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 A1L4Q6 167 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 PRORSD1PA6NEY8 169 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 CFAP73A6NFT4 308 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC22A20A6NK97 555 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 GJE1A6NN92 205 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 HSPB2A8KAH6 182 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 EIF1AYO14602 144 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 ADAMDEC1O15204 470 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 IL2RAP01589 272 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 FCGR2AP12318 317 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 HTR3AP46098 478 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 GZMMP51124 257 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 SUCLG1P53597 346 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 CLDN15P56746 228 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 SESN3P58005 492 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 HSPB2Q16082 182 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF311Q5JNZ3 666 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 INTS11Q5TA45 600 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 FAM91A1Q658Y4 838 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 DHRS4L2Q6PKH6 230 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 CHMP1BQ7LBR1 199 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 GRINAQ7Z429 371 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 CALHM3Q86XJ0 350 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 BHLHE22Q8NFJ8 381 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 TNIP2Q8NFZ5 429 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 OR10Q1Q8NGQ4 319 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 OR10A6Q8NH74 314 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF563Q8TA94 476 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 CA5BP1Q8WTZ4 195 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 SLC25A43Q8WUT9 341 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 ZNF524Q96C55 264 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 REXO5Q96IC2 774 aaKnown RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 KLHL15Q96M94 604 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 TMEM185BQ9H7F4 350 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 RLIMQ9NVW2 624 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 UNC79Q9P2D8 2635 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 PLEKHB1Q9UF11 243 aaPredicted RBP10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 Q9UFV3 132 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 AP3M1Q9Y2T2 418 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 CHST2Q9Y4C5 530 aa10.54□□□□□ -0.72
TRAFD1-209ENST00000552896 PKDREJQ9NTG1 2253 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 FAM220BPB1ANY3 271 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 H0YC42 278 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 AP3D1O14617 1153 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 SERPINB7O75635 380 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 TOXO94900 526 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 GP1BBP13224 206 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 IL11P20809 199 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 AQP1P29972 269 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 RYKP34925 604 aa10.53□□□□□ -0.72
TRAFD1-209ENST00000552896 APOBEC1P41238 236 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms