RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 RNF6Q9Y252 685 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GPC6Q9Y625 555 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GMEB1Q9Y692 573 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CSMD1Q96PZ7 3565 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 MAST4O15021 2626 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 HCFC1P51610 2035 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 A0A0G2JNJ9 132 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 C7orf72A4D263 438 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 CFAP73A6NFT4 308 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 WIPF3A6NGB9 483 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 CCT8L1PA6NM43 557 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 LINC01387J3KSC0 135 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SHOX2O60902 331 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-215ENST00000478531 DCTN3O75935 186 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 CLDN1O95832 211 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 FAM107AO95990 144 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 NPPAP01160 153 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 THBS1P07996 1170 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 HOXD4P09016 255 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-215ENST00000478531 GP1BBP13224 206 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 UQCRBP14927 111 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 ELK4P28324 431 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SHC1P29353 583 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SLC6A8P48029 635 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 IDH2P48735 452 aaKnown RBP6.21□□□□□ -1.42
BRCA1-215ENST00000478531 CLDN15P56746 228 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SESN3P58005 492 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 EEF1A1P68104 462 aaKnown RBP6.21□□□□□ -1.42
BRCA1-215ENST00000478531 HOXC5Q00444 222 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 ART3Q13508 389 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SF3B4Q15427 424 aaKnown RBP eCLIP6.21□□□□□ -1.422e-6■■■□□ 15.1
BRCA1-215ENST00000478531 CDSNQ15517 529 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SGCBQ16585 318 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 RNF220Q5VTB9 566 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 PRAMEF8Q5VWM4 474 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 PRAMEF7Q5VXH5 474 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 NSUN5P2Q63ZY6 315 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 P4HA3Q7Z4N8 544 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SERPINA11Q86U17 422 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 GGNQ86UU5 652 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 ARMC8Q8IUR7 673 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 GCNT2Q8N0V5 402 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 CLIP4Q8N3C7 705 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 CADM2Q8N3J6 435 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 C9orf106Q8NAJ2 232 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 NAXEQ8NCW5 288 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 TNIP2Q8NFZ5 429 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 ZPLD1Q8TCW7 415 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 CA5BP1Q8WTZ4 195 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 TMEM234Q8WY98 164 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 ST8SIA1Q92185 356 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 DNAJA3Q96EY1 480 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF845Q96IR2 970 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-215ENST00000478531 MRGPRX4Q96LA9 322 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 LRRC37BQ96QE4 947 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SH3GL1Q99961 368 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 SPATA5L1Q9BVQ7 753 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 ARMC7Q9H6L4 198 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 BCL2L10Q9HD36 194 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 EXOSC3Q9NQT5 275 aaKnown RBP6.21□□□□□ -1.42
BRCA1-215ENST00000478531 Q9UFV3 132 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 USP22Q9UPT9 525 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 IFT52Q9Y366 437 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 AP4B1Q9Y6B7 739 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 APCP25054 2843 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 TEX15Q9BXT5 2789 aa6.21□□□□□ -1.42
BRCA1-215ENST00000478531 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 NKX2-6A6NCS4 301 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SLC22A20A6NK97 555 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 EPPINO95925 133 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 IL2RAP01589 272 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 ETS2P15036 469 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CCNA2P20248 432 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 BMP5P22003 454 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PSMA4P25789 261 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SLC7A1P30825 629 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 CHRNB4P30926 498 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PCGF2P35227 344 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SLC7A2P52569 658 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 AGFG1P52594 562 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 EEFSECP57772 596 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 RPS3AP61247 264 aaKnown RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 RAC1P63000 192 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 DMTNQ08495 405 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 EPS8Q12929 822 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SELENBP1Q13228 472 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PON3Q15166 354 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 BCL2A1Q16548 175 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 TMEM176BQ3YBM2 270 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 AP1ARQ63HQ0 302 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 HBMQ6B0K9 141 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 C3orf33Q6P1S2 294 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SEM1Q6ZVN7 128 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 PLEKHM3Q6ZWE6 761 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 NET1Q7Z628 596 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-215ENST00000478531 COMTD1Q86VU5 262 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 METTL25Q8N6Q8 603 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 SMYD1Q8NB12 490 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 OR10D3Q8NH80 312 aa6.2□□□□□ -1.42
BRCA1-215ENST00000478531 FNDC9Q8TBE3 224 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms