RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 C11orf65Q8NCR3 313 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 NAXEQ8NCW5 288 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 HIPK4Q8NE63 616 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 TNIP2Q8NFZ5 429 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PMM1Q92871 262 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF845Q96IR2 970 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 ECSITQ9BQ95 431 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PINK1Q9BXM7 581 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 RSPO3Q9BXY4 272 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 EXOSC3Q9NQT5 275 aaKnown RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 COQ3Q9NZJ6 369 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 GMPR2Q9P2T1 348 aaKnown RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 Q9UFV3 132 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 IFT52Q9Y366 437 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 CHST2Q9Y4C5 530 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 AP4B1Q9Y6B7 739 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF407Q9C0G0 2248 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 NCKAP5O14513 1909 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 FLNCQ14315 2725 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 USP9XQ93008 2570 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CFAP73A6NFT4 308 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CCT8L1PA6NM43 557 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 FAM90A27PA6NNH2 459 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 LINC01387J3KSC0 135 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 TNFSF11O14788 317 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CXCL13O43927 109 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 TPST1O60507 370 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 DNAJA2O60884 412 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 SHOX2O60902 331 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-222ENST00000478095 NTN1O95631 604 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 FAM107AO95990 144 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 NPPAP01160 153 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 THBS1P07996 1170 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 HOXD4P09016 255 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-222ENST00000478095 GP1BBP13224 206 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 ETS2P15036 469 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CCNA2P20248 432 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 ELK4P28324 431 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 PCGF2P35227 344 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 EIF1AXP47813 144 aaKnown RBP9.24□□□□□ -0.93
HDAC6-222ENST00000478095 SLC6A8P48029 635 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 GZMMP51124 257 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 AGFG1P52594 562 aaKnown RBP9.24□□□□□ -0.93
HDAC6-222ENST00000478095 RAC1P63000 192 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 HOXC5Q00444 222 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 RBBP4Q09028 425 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 MERTKQ12866 999 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 EPS8Q12929 822 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 ART3Q13508 389 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CTU2Q2VPK5 515 aaKnown RBP9.24□□□□□ -0.93
HDAC6-222ENST00000478095 GLIPR1L2Q4G1C9 344 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 GKAP1Q5VSY0 366 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-222ENST00000478095 HIST2H2BCQ6DN03 193 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 PLEKHM3Q6ZWE6 761 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 SERPINA11Q86U17 422 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 COMTD1Q86VU5 262 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 ZGRF1Q86YA3 2104 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 GRAMD2AQ8IUY3 354 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 LACC1Q8IV20 430 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 GCNT2Q8N0V5 402 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 METTL25Q8N6Q8 603 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 SMYD1Q8NB12 490 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 ZPLD1Q8TCW7 415 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CA5BP1Q8WTZ4 195 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 ST8SIA1Q92185 356 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 FIG4Q92562 907 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CMTM5Q96DZ9 223 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 DNAJA3Q96EY1 480 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 MRGPRX4Q96LA9 322 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 PSMG3-AS1Q96PY0 264 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 SH3GL1Q99961 368 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 SPATA9Q9BWV2 254 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 CMTM6Q9NX76 183 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF232Q9UNY5 417 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 BAHCC1Q9P281 2608 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 HIVEP3Q5T1R4 2406 aa9.24□□□□□ -0.93
HDAC6-222ENST00000478095 COL12A1Q99715 3063 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 A0A0J9YW62 118 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 A0A1W2PNR3 127 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 NKX2-6A6NCS4 301 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 MBD3L4A6NDZ8 208 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 MBD3L3A6NE82 208 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 MBD3L5A6NJ08 208 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 CD8B2A6NJW9 211 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 SLC22A20A6NK97 555 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ETV2O00321 342 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 GCM2O75603 506 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 DCTN3O75935 186 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 TGM6O95932 706 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 IL2RAP01589 272 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 COL8A1P27658 744 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 ADH6P28332 368 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 PRDX6P30041 224 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 CHRNB4P30926 498 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 PRKAR1BP31321 381 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 SLC7A2P52569 658 aa9.23□□□□□ -0.93
HDAC6-222ENST00000478095 PCBP3P57721 371 aaKnown RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 EEFSECP57772 596 aaKnown RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 RPS3AP61247 264 aaKnown RBP9.23□□□□□ -0.93
HDAC6-222ENST00000478095 DMTNQ08495 405 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms