RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ABCD2Q9UBJ2 740 aa4.62□□□□□ -1.67
USP54-206ENST00000433394 ARAP1Q96P48 1450 aa4.62□□□□□ -1.67
USP54-206ENST00000433394 CLASP1Q7Z460 1538 aa4.62□□□□□ -1.67
USP54-206ENST00000433394 KIAA0556O60303 1618 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 A0A087WWV3 80 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 RS1O15537 224 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 EFNA2O43921 213 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 HCN1O60741 890 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 B4GALT2O60909 372 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 NCF2P19878 526 aaPredicted RBP4.61□□□□□ -1.67
USP54-206ENST00000433394 NTSP30990 170 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 GCKP35557 465 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 CSRP3P50461 194 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 MRPS11P82912 194 aaKnown RBP4.61□□□□□ -1.67
USP54-206ENST00000433394 CHRNB3Q05901 458 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 SLC1A5Q15758 541 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 Q1RN00 199 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 TRIM16LQ309B1 348 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 ATAD3CQ5T2N8 411 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 CCDC137Q6PK04 289 aaKnown RBP4.61□□□□□ -1.67
USP54-206ENST00000433394 VITQ6UXI7 678 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 PIGCQ92535 297 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 PELI1Q96FA3 418 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 COQ2Q96H96 371 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 SIGLEC12Q96PQ1 595 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 PLIN2Q99541 437 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 CITED1Q99966 193 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 LRRN3Q9H3W5 708 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 SGK2Q9HBY8 427 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 WRAP73Q9P2S5 460 aaPredicted RBP4.61□□□□□ -1.67
USP54-206ENST00000433394 RASD1Q9Y272 281 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 CSAG2Q9Y5P2 127 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 CACNA1FO60840 1977 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 HECW1Q76N89 1606 aa4.61□□□□□ -1.67
USP54-206ENST00000433394 GON4LQ3T8J9 2241 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 LRP5LA4QPB2 252 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 CCDC169A6NNP5 214 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 PP2D1A8MPX8 630 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 UBXN8O00124 270 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 SULT2B1O00204 365 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 HIP1O00291 1037 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 TAPBPO15533 448 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 TBL1XO60907 577 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 GAS8-AS1O95177 125 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 STSP08842 583 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 GATA1P15976 413 aaPredicted RBP4.6□□□□□ -1.67
USP54-206ENST00000433394 GDF1P27539 372 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 P2RY4P51582 365 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 OC90Q02509 493 aaPredicted RBP4.6□□□□□ -1.67
USP54-206ENST00000433394 BAIAP2L2Q6UXY1 529 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 MARCH9Q86YJ5 346 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 NAXDQ8IW45 347 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 LINC01561Q8N1V8 128 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 KIR3DL3Q8N743 410 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 NECAB1Q8N987 351 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 NIPSNAP3BQ9BS92 247 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 RAB34Q9BZG1 259 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 PKIBQ9C010 78 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 PAK1IP1Q9NWT1 392 aaPredicted RBP4.6□□□□□ -1.67
USP54-206ENST00000433394 SPRR3Q9UBC9 169 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 SEC14L3Q9UDX4 400 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 NAALAD2Q9Y3Q0 740 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 PNPLA6Q8IY17 1366 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 ANKRD30BQ9BXX2 1392 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 DISP1Q96F81 1524 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 CFAP43Q8NDM7 1665 aa4.6□□□□□ -1.67
USP54-206ENST00000433394 MED7O43513 233 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 ZNF354AO60765 605 aaPredicted RBP4.59□□□□□ -1.67
USP54-206ENST00000433394 SCRG1O75711 98 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 GPX5O75715 221 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 AP2A1O95782 977 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 LALBAP00709 142 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 TPM2P07951 284 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 POU2F1P14859 743 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 FGF9P31371 208 aaPredicted RBP4.59□□□□□ -1.67
USP54-206ENST00000433394 CD80P33681 288 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 P2RY1P47900 373 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 CCT3P49368 545 aaKnown RBP4.59□□□□□ -1.67
USP54-206ENST00000433394 SLC26A2P50443 739 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 EFNB2P52799 333 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 UBE2HP62256 183 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 RPL23AP62750 156 aaKnown RBP4.59□□□□□ -1.67
USP54-206ENST00000433394 TNFRSF17Q02223 184 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 TP53I3Q53FA7 332 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 BOLA3Q53S33 107 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 TPGS2Q68CL5 300 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 TAS2R42Q7RTR8 314 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 POGZQ7Z3K3 1410 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 P2RY8Q86VZ1 359 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 LRRC75A-AS1Q8N1F1 130 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 UBE2J2Q8N2K1 259 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 GPD1LQ8N335 351 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 OR5L2Q8NGL0 311 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 FGGYQ96C11 551 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 TPD52L3Q96J77 140 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 CYP2S1Q96SQ9 504 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 COPS8Q99627 209 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 FN3KRPQ9HA64 309 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 IL36GQ9NZH8 169 aa4.59□□□□□ -1.67
USP54-206ENST00000433394 BFARQ9NZS9 450 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms