RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PEX6Q13608 980 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ELAVL3Q14576 367 aaKnown RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 LAGE3Q14657 143 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 MAPK6Q16659 721 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 GGTA1PQ4G0N0 100 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 CGB2Q6NT52 195 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ACSM5Q6NUN0 579 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 C17orf82Q86X59 251 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 GPR137CQ8N3F9 429 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZSCAN4Q8NAM6 433 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZNF671Q8TAW3 534 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 TOMM40LQ969M1 308 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 PELI1Q96FA3 418 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZBED6CLQ96FA7 236 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 C7orf34Q96L11 122 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 C12orf66Q96MD2 445 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 TTC25Q96NG3 672 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 TGM7Q96PF1 710 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 MCCC1Q96RQ3 725 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 RIT2Q99578 217 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 EDEM2Q9BV94 578 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 NFKBIZQ9BYH8 718 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 GLIPR2Q9H4G4 154 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 IKZF5Q9H5V7 419 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 PRODH2Q9UF12 536 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 CRLS1Q9UJA2 301 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 NPIPA1Q9UND3 350 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 SCML2Q9UQR0 700 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 WDR45Q9Y484 360 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 ANKARQ7Z5J8 1434 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 PCNTO95613 3336 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 KIF16BQ96L93 1317 aa2.4□□□□□ -2.03
HMGB1P27-201ENST00000431429 COL14A1Q05707 1796 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 C15orf38-AP3S2A0A0A6YYH1 394 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 FRG2CA6NGY1 282 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 MSH4O15457 936 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 NUDT21O43809 227 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 CRLF1O75462 422 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 CA1P00915 261 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 CGAP01215 116 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 UGT2B4P06133 528 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 RPS2P15880 293 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 CYP2B6P20813 491 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 IDSP22304 550 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 MMP11P24347 488 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 ATP5A1P25705 553 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 LAP3P28838 519 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 HPCAL1P37235 193 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 P2RY1P47900 373 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 STARP49675 285 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 AP3M2P53677 418 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 HMGCS2P54868 508 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 VLDLRP98155 873 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 BDH1Q02338 343 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 RGS1Q08116 209 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 PUDPQ08623 228 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 C1orf61Q13536 156 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 RUNX3Q13761 415 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 KCNJ11Q14654 390 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 PDK3Q15120 406 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRC23Q53EV4 343 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 RNLSQ5VYX0 342 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRC70Q7Z2Q7 622 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 ERICH1Q86X53 443 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 MARCH9Q86YJ5 346 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRC75A-AS1Q8N1F1 130 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 CATSPER1Q8NEC5 780 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR10A7Q8NGE5 316 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR4D5Q8NGN0 318 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR1F12Q8NHA8 337 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 TRMT10AQ8TBZ6 339 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 TFB1MQ8WVM0 346 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 GTSF1Q8WW33 167 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 SHC3Q92529 594 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 TADA1Q96BN2 335 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 SH3YL1Q96HL8 342 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 PPP1R16AQ96I34 528 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 SECISBP2Q96T21 854 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 PPDPFQ9H3Y8 114 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 RAB18Q9NP72 206 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 TIGARQ9NQ88 270 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 UFSP2Q9NUQ7 469 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 B3GNT2Q9NY97 397 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 SPRR3Q9UBC9 169 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 RIMS3Q9UJD0 308 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLCO1B1Q9Y6L6 691 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 C10orf71Q711Q0 1435 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 XRN1Q8IZH2 1706 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 MARF1Q9Y4F3 1742 aaKnown RBP2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 NRXN1Q9ULB1 1477 aa2.39□□□□□ -2.03
HMGB1P27-201ENST00000431429 CNTNAP1P78357 1384 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 TULP4Q9NRJ4 1543 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 MYOM1P52179 1685 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 TRAV26-1A0A087WT03 109 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 LOC100131303A0A0U1RQF7 123 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR6C65A6NJZ3 312 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 CCT8L1PA6NM43 557 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 A8MX80 341 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 E9PAM4 449 aa2.38□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRTM2O43300 516 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms