RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 ZC3HAV1LQ96H79 300 aaKnown RBP4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 DACH2Q96NX9 599 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 QRFPRQ96P65 431 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 GPR21Q99679 349 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 CCDC77Q9BR77 488 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 KLHL4Q9C0H6 718 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 ATG10Q9H0Y0 220 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 KLHL31Q9H511 634 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 PARVBQ9HBI1 364 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 PROK2Q9HC23 129 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 ADAP2Q9NPF8 381 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 ABCF3Q9NUQ8 709 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 TUBA8Q9NY65 449 aaPredicted RBP4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 CPSF2Q9P2I0 782 aaKnown RBP4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 MTRF1LQ9UGC7 380 aaKnown RBP4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 ERVK-11Q9UQG0 969 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 CMAHPQ9Y471 501 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 CCL27Q9Y4X3 112 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 CEPT1Q9Y6K0 416 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 IKBKGQ9Y6K9 419 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 MPDZO75970 2070 aa4.18□□□□□ -1.74
CDC42EP3-202ENST00000422687 ATP6AP2A0A1C7CYW4 349 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 URADA6NGE7 173 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 CD8B2A6NJW9 211 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 KDM4EB2RXH2 506 aaPredicted RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 INAFM1C9JVW0 142 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 G3V3Y1 287 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 PSMD12O00232 456 aaPredicted RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 WWP2O00308 870 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 OR1F1O43749 312 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 CTNSO60931 367 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 AVILO75366 819 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 ATP6AP2O75787 350 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 TBX6O95947 436 aaPredicted RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 CCL3P10147 92 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 PAX1P15863 534 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 CHATP28329 748 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 OPRM1P35372 400 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 DNASE1L1P49184 302 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 AP1S2P56377 157 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 RAB38P57729 211 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 RAB8AP61006 207 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 CRYZQ08257 329 aaKnown RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 SCARB2Q14108 478 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 ADPRMQ3LIE5 342 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 NHSL2Q5HYW2 709 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 Q5PR19 223 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 NSUN5P2Q63ZY6 315 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF470Q6ECI4 717 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 UGT3A1Q6NUS8 523 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 OPN5Q6U736 354 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF66Q6ZN08 573 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 DEF8Q6ZN54 512 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 FAM47EQ6ZV65 393 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 PEX26Q7Z412 305 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 SYCE1Q8N0S2 351 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 TBC1D19Q8N5T2 526 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 OTUD6BQ8N6M0 293 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF321PQ8N8H1 164 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 GPATCH11Q8N954 259 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 NEIL3Q8TAT5 605 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 NUBPLQ8TB37 319 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 TRPC4APQ8TEL6 797 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 EEF1AKMT1Q8WVE0 214 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 C1orf54Q8WWF1 131 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 SLC5A11Q8WWX8 675 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 NEIL2Q969S2 332 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 RRNAD1Q96FB5 475 aaKnown RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 TSGA10Q9BZW7 698 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 UBQLN3Q9H347 655 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 HRH4Q9H3N8 390 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 LIN28AQ9H9Z2 209 aaKnown RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 PELI2Q9HAT8 420 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 FBXO6Q9NRD1 293 aaPredicted RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 PRTFDC1Q9NRG1 225 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 PNO1Q9NRX1 252 aaKnown RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 TRMT1Q9NXH9 659 aaKnown RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 FBXO5Q9UKT4 447 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 PACSIN2Q9UNF0 486 aaPredicted RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 ZNF148Q9UQR1 794 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 RAP2CQ9Y3L5 183 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 SVEP1Q4LDE5 3571 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 ROS1P08922 2347 aa4.17□□□□□ -1.74
CDC42EP3-202ENST00000422687 LOC100509620A0A075B734 347 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 MAGEB16A2A368 324 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CTAGE9A4FU28 777 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 LRIT2A6NDA9 550 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CLDN4O14493 209 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 TRIM3O75382 744 aaPredicted RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 CRLF1O75462 422 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 SOX30O94993 753 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 FTCDO95954 541 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 C1QAP02745 245 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 IGKV3-11P04433 115 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 P04436 131 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 PTMAP06454 111 aaKnown RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 F7P08709 466 aaPredicted RBP4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 QDPRP09417 244 aa4.16□□□□□ -1.74
CDC42EP3-202ENST00000422687 MLNP12872 115 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms