RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 MS4A5Q9H3V2 200 aa7.74□□□□□ -1.17
TRIM39-206ENST00000420746 PPANQ9NQ55 473 aaKnown RBP7.74□□□□□ -1.17
TRIM39-206ENST00000420746 OXSMQ9NWU1 459 aa7.74□□□□□ -1.17
TRIM39-206ENST00000420746 CRNNQ9UBG3 495 aaPredicted RBP7.74□□□□□ -1.17
TRIM39-206ENST00000420746 ACTL7BQ9Y614 415 aa7.74□□□□□ -1.17
TRIM39-206ENST00000420746 A0A1W2PQD3 144 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 ZNF716A6NP11 495 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 PPIHO43447 177 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 SYNGR3O43761 229 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 MRPL33O75394 65 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 RP2O75695 350 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 SEC14L2O76054 403 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 KCNH1O95259 989 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 IGLV1-44P01699 117 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 COL8A2P25067 703 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 MPGP29372 298 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 LCN1P31025 176 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 PCGF2P35227 344 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 THBS4P35443 961 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 MTNR1AP48039 350 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 PIK3CGP48736 1102 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 ATP4BP51164 291 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 SLC16A1P53985 500 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 SUMO3P55854 103 aaPredicted RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 KRTAP10-3P60369 221 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 RPL15P61313 204 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 FRG1Q14331 258 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 TRIP13Q15645 432 aaPredicted RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 CPSF6Q16630 551 aaKnown RBP eCLIP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 MMEL1Q495T6 779 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 GLE1Q53GS7 698 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 FAM180BQ6P0A1 224 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 C9orf139Q6ZV77 190 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 COMMD6Q7Z4G1 85 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 R3HCC1LQ7Z5L2 792 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 CDK20Q8IZL9 346 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 FAM9CQ8IZT9 166 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 NAT8LQ8N9F0 302 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 L3MBTL4Q8NA19 623 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 ZNF527Q8NB42 609 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 ARL5BQ96KC2 179 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 ZNF317Q96PQ6 595 aaPredicted RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 MRPL1Q9BYD6 325 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 TPK1Q9H3S4 243 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 PFDN4Q9NQP4 134 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 NECAP2Q9NVZ3 263 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 SENP1Q9P0U3 644 aa7.73□□□□□ -1.17
TRIM39-206ENST00000420746 C19orf53Q9UNZ5 99 aaPredicted RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 DYNC2H1Q8NCM8 4307 aaKnown RBP7.73□□□□□ -1.17
TRIM39-206ENST00000420746 DNAH3Q8TD57 4116 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 A0A1W2PNR3 127 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 SH3PXD2BA1X283 911 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 M0R233 179 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 IGHV2-5P01817 119 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 KRT14P02533 472 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 HPXP02790 462 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 OPN1MWP04001 364 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 CRYBA1P05813 215 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 CECR9P0C854 216 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 OPN1MW2P0DN77 364 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 OPN1MW3P0DN78 364 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 CALCRP30988 508 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 MPIP34949 423 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 ALDH9A1P49189 494 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 PRIM2P49643 509 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 CSNK2A1P68400 391 aaPredicted RBP7.72□□□□□ -1.17
TRIM39-206ENST00000420746 TBX2Q13207 712 aaPredicted RBP7.72□□□□□ -1.17
TRIM39-206ENST00000420746 SLC25A53Q5H9E4 307 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 FAM205BPQ63HN1 556 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 C3orf33Q6P1S2 294 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 ANKRD16Q6P6B7 361 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 MTDHQ86UE4 582 aaKnown RBP7.72□□□□□ -1.17
TRIM39-206ENST00000420746 TEX9Q8N6V9 391 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 OR52E4Q8NGH9 312 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 OR4C3Q8NH37 302 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 FBXO27Q8NI29 283 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 STAG3L4Q8TBR4 150 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 YIPF5Q969M3 257 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 RBBP8Q99708 897 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 KLHDC3Q9BQ90 382 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 GIMAP4Q9NUV9 329 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 C1RLQ9NZP8 487 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 UPB1Q9UBR1 384 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 ICAM5Q9UMF0 924 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 REXO2Q9Y3B8 237 aaKnown RBP7.72□□□□□ -1.17
TRIM39-206ENST00000420746 ANGPTL3Q9Y5C1 460 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 SACSQ9NZJ4 4579 aa7.72□□□□□ -1.17
TRIM39-206ENST00000420746 FAM181BA6NEQ2 426 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 CCDC188H7C350 402 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 ETV2O00321 342 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 ULK1O75385 1050 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 ERLIN1O75477 346 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 IGKV1D-16P01601 117 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 IFI6P09912 130 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 HOXB1P14653 301 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 NTF4P34130 210 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 SLC12A2P55011 1212 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 HGFACQ04756 655 aa7.71□□□□□ -1.18
TRIM39-206ENST00000420746 GALNT1Q10472 559 aaPredicted RBP7.71□□□□□ -1.18
TRIM39-206ENST00000420746 TRADDQ15628 312 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms