RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DOPEY1Q5JWR5 2465 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 NME4O00746 187 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 AP3D1O14617 1153 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 GSC2O15499 205 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 SEC14L5O43304 696 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 TOXO94900 526 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 NTN1O95631 604 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 EPPINO95925 133 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 AQP1P29972 269 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 EIF1P41567 113 aaKnown RBP14.92□□□□□ -0.02
CXCL1-201ENST00000395761 SESN3P58005 492 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 CYP51A1Q16850 503 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 LIN52Q52LA3 116 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 LSRQ86X29 649 aaPredicted RBP14.92□□□□□ -0.02
CXCL1-201ENST00000395761 CCDC71Q8IV32 467 aaPredicted RBP14.92□□□□□ -0.02
CXCL1-201ENST00000395761 TRIB1Q96RU8 372 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 MMADHCQ9H3L0 296 aaPredicted RBP14.92□□□□□ -0.02
CXCL1-201ENST00000395761 TMEM185BQ9H7F4 350 aa14.92□□□□□ -0.02
CXCL1-201ENST00000395761 EXOSC3Q9NQT5 275 aaKnown RBP14.92□□□□□ -0.02
CXCL1-201ENST00000395761 GPC6Q9Y625 555 aaPredicted RBP14.92□□□□□ -0.02
CXCL1-201ENST00000395761 COL12A1Q99715 3063 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 A0A0G2JNJ9 132 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 A1L4Q6 167 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 CDHR4A6H8M9 788 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 CLCA1A8K7I4 914 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 ETV2O00321 342 aaPredicted RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 GCM2O75603 506 aaPredicted RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 DNAJC8O75937 253 aaPredicted RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 THBS1P07996 1170 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 PABPC4LP0CB38 370 aaKnown RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 GKN3PP0CG01 181 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 HSD17B1P14061 328 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 ETS2P15036 469 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 PGCP20142 388 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 SHC1P29353 583 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 SMSP52788 366 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 RBBP4Q09028 425 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 LARS2Q15031 903 aaKnown RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 SLC25A53Q5H9E4 307 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 ZNF311Q5JNZ3 666 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 SAMD4BQ5PRF9 694 aaKnown RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 NSUN5P2Q63ZY6 315 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 ADGRE4PQ86SQ3 457 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 GGNQ86UU5 652 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 COMTD1Q86VU5 262 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 MEIOBQ8N635 442 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 C11orf65Q8NCR3 313 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 HIPK4Q8NE63 616 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 TNIP2Q8NFZ5 429 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 OR10Q1Q8NGQ4 319 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 RND1Q92730 232 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 MRGPRX4Q96LA9 322 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 CADM1Q9BY67 442 aaKnown RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 ADA2Q9NZK5 511 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 Q9UFV3 132 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 ZNF232Q9UNY5 417 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 USP22Q9UPT9 525 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 RNF6Q9Y252 685 aa14.91□□□□□ -0.02
CXCL1-201ENST00000395761 USP9YO00507 2555 aaPredicted RBP14.91□□□□□ -0.02
CXCL1-201ENST00000395761 HEATR5AQ86XA9 2040 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 PRORSD1PA6NEY8 169 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 CD8B2A6NJW9 211 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 TPST1O60507 370 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 CLDN1O95832 211 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ADH6P28332 368 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 IDH2P48735 452 aaKnown RBP14.9□□□□□ -0.02
CXCL1-201ENST00000395761 RAC1P63000 192 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 LIPEQ05469 1076 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 SF3B4Q15427 424 aaKnown RBP eCLIP14.9□□□□□ -0.02
CXCL1-201ENST00000395761 RNF220Q5VTB9 566 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ERICH5Q6P6B1 374 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 PGM2L1Q6PCE3 622 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 LILRA2Q8N149 483 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ZNF808Q8N4W9 903 aaPredicted RBP14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ZNF563Q8TA94 476 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ST8SIA1Q92185 356 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 SDCCAG3Q96C92 435 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ZNF845Q96IR2 970 aaPredicted RBP14.9□□□□□ -0.02
CXCL1-201ENST00000395761 THTPAQ9BU02 230 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ALG2Q9H553 416 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 CALHM2Q9HA72 323 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 ACER3Q9NUN7 267 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 GMPR2Q9P2T1 348 aaKnown RBP14.9□□□□□ -0.02
CXCL1-201ENST00000395761 IFT52Q9Y366 437 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 KIAA1549Q9HCM3 1950 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 PCNX1Q96RV3 2341 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 DOPEY2Q9Y3R5 2298 aa14.9□□□□□ -0.02
CXCL1-201ENST00000395761 A0A0J9YW62 118 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 CFAP73A6NFT4 308 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 FAM220BPB1ANY3 271 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 EIF1AYO14602 144 aaKnown RBP14.89□□□□□ -0.03
CXCL1-201ENST00000395761 FRS3O43559 492 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 PRG2P13727 222 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 HTR1EP28566 365 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 PCGF2P35227 344 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 SFTPDP35247 375 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 ACAA2P42765 397 aaKnown RBP14.89□□□□□ -0.03
CXCL1-201ENST00000395761 SLC6A8P48029 635 aa14.89□□□□□ -0.03
CXCL1-201ENST00000395761 GSK3BP49841 420 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms