RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ITLN2Q8WWU7 325 aaPredicted RBP17.5■□□□□ 0.39
GTF3A-201ENST00000381140 RND1Q92730 232 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 PMM1Q92871 262 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 ZNF524Q96C55 264 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 SDCCAG3Q96C92 435 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 SH3GL1Q99961 368 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 RLIMQ9NVW2 624 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 CMTM6Q9NX76 183 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 CD300AQ9UGN4 299 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 ZNF232Q9UNY5 417 aa17.5■□□□□ 0.39
GTF3A-201ENST00000381140 SPTAN1Q13813 2472 aaKnown RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 H0YHG0 523 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 LINC01387J3KSC0 135 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 DNAJA2O60884 412 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 PDE5AO76074 875 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 PRKCAP17252 672 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 PGCP20142 388 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 IL11P20809 199 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 EIF1P41567 113 aaKnown RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 SUCLG1P53597 346 aaKnown RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 CLDN20P56880 219 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 EEFSECP57772 596 aaKnown RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 PLAURQ03405 335 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.392e-7■■■■■ 32.9
GTF3A-201ENST00000381140 ZNF311Q5JNZ3 666 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 PRAMEF8Q5VWM4 474 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 PRAMEF7Q5VXH5 474 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 POMZP3Q6PJE2 187 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 CCDC71Q8IV32 467 aaPredicted RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 CMIPQ8IY22 773 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 C11orf65Q8NCR3 313 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 TMEM38AQ9H6F2 299 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 BCL2L10Q9HD36 194 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 DNAJB12Q9NXW2 375 aaKnown RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 COQ3Q9NZJ6 369 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 STOML1Q9UBI4 398 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 ANGPT4Q9Y264 503 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 GPC6Q9Y625 555 aaPredicted RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 AP4B1Q9Y6B7 739 aa17.49■□□□□ 0.39
GTF3A-201ENST00000381140 INTS1Q8N201 2190 aaKnown RBP17.49■□□□□ 0.39
GTF3A-201ENST00000381140 DOPEY1Q5JWR5 2465 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 COL12A1Q99715 3063 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 MPDZO75970 2070 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 C7orf72A4D263 438 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 PRORSD1PA6NEY8 169 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 CLCA1A8K7I4 914 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 EIF1AYO14602 144 aaKnown RBP17.48■□□□□ 0.39
GTF3A-201ENST00000381140 AP3D1O14617 1153 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 CIB2O75838 187 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 HSD17B1P14061 328 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 ME2P23368 584 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 ADRM1Q16186 407 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 BCL2A1Q16548 175 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 PPP4R4Q6NUP7 873 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 NET1Q7Z628 596 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-201ENST00000381140 KRT73Q86Y46 540 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 PTOV1Q86YD1 416 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 ZZZ3Q8IYH5 903 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 ZNF808Q8N4W9 903 aaPredicted RBP17.48■□□□□ 0.39
GTF3A-201ENST00000381140 METTL25Q8N6Q8 603 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 ECSITQ9BQ95 431 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 KAT8Q9H7Z6 458 aaKnown RBP17.48■□□□□ 0.39
GTF3A-201ENST00000381140 RNF6Q9Y252 685 aa17.48■□□□□ 0.39
GTF3A-201ENST00000381140 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 EPPINO95925 133 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 THBS1P07996 1170 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 PABPC4LP0CB38 370 aaKnown RBP17.47■□□□□ 0.39
GTF3A-201ENST00000381140 GKN3PP0CG01 181 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 GP1BBP13224 206 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 PSMA4P25789 261 aaKnown RBP17.47■□□□□ 0.39
GTF3A-201ENST00000381140 SFTPDP35247 375 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 SLC6A8P48029 635 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 SESN3P58005 492 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 EEF1A1P68104 462 aaKnown RBP17.47■□□□□ 0.39
GTF3A-201ENST00000381140 ELF3P78545 371 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-201ENST00000381140 MERTKQ12866 999 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 NSUN5P2Q63ZY6 315 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 LACC1Q8IV20 430 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 CLIP4Q8N3C7 705 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 HIPK4Q8NE63 616 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 TNIP2Q8NFZ5 429 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 ZPLD1Q8TCW7 415 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 TMEM234Q8WY98 164 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 MRGPRX4Q96LA9 322 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 EXOSC3Q9NQT5 275 aaKnown RBP17.47■□□□□ 0.39
GTF3A-201ENST00000381140 IFT52Q9Y366 437 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 PTPN13Q12923 2485 aa17.47■□□□□ 0.39
GTF3A-201ENST00000381140 A0A0G2JNJ9 132 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 CDHR4A6H8M9 788 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 ADAM11O75078 769 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 ETS2P15036 469 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 IDH2P48735 452 aaKnown RBP17.46■□□□□ 0.39
GTF3A-201ENST00000381140 CLDN15P56746 228 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 SGCBQ16585 318 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 XKRXQ6PP77 449 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 SEM1Q6ZVN7 128 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 P4HA3Q7Z4N8 544 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 GRAMD2AQ8IUY3 354 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 LILRA2Q8N149 483 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 ST8SIA1Q92185 356 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms