RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SLC6A8P48029 635 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 LIMS1P48059 325 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 MASP1P48740 699 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 HMGA2P52926 109 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 CDH12P55289 794 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 GFRA1P56159 465 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 PPIAP62937 165 aaKnown RBP8.59□□□□□ -1.03
RFX3-201ENST00000302303 CBFBQ13951 182 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 ATG4DQ86TL0 474 aaPredicted RBP8.59□□□□□ -1.03
RFX3-201ENST00000302303 PIK3C3Q8NEB9 887 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 OR5M1Q8NGP8 315 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 SLC38A4Q969I6 547 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
RFX3-201ENST00000302303 ZNF559Q9BR84 538 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 ZNF426Q9BUY5 554 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 TRIM15Q9C019 465 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 ARMC7Q9H6L4 198 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 ACKR4Q9NPB9 350 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 PLSCR2Q9NRY7 297 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 ACER3Q9NUN7 267 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 KLHL28Q9NXS3 571 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 TAS2R10Q9NYW0 307 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 RHCGQ9UBD6 479 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 TESQ9UGI8 421 aaKnown RBP8.59□□□□□ -1.03
RFX3-201ENST00000302303 RIMS3Q9UJD0 308 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 OSGIN1Q9UJX0 560 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 PRDM4Q9UKN5 801 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 BOKQ9UMX3 212 aaPredicted RBP8.59□□□□□ -1.03
RFX3-201ENST00000302303 VDAC3Q9Y277 283 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 SLC9A8Q9Y2E8 581 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 LIPGQ9Y5X9 500 aa8.59□□□□□ -1.03
RFX3-201ENST00000302303 IGSF10Q6WRI0 2623 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 SMG1Q96Q15 3661 aaKnown RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 IGKV1D-42A0A075B6H8 117 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 CPSF4LA6NMK7 179 aaKnown RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 TIPRLO75663 272 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 KRT36O76013 467 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 RASAL1O95294 804 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 IGHG3P01860 377 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 IFNW1P05000 195 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 FABP3P05413 133 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 RHCEP18577 417 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 PGCP20142 388 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 SHC1P29353 583 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 SLC1A3P43003 542 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 CCR4P51679 360 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 CLDN15P56746 228 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 EGR4Q05215 589 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 CHRNB3Q05901 458 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 FOXF1Q12946 379 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 GLYR1Q49A26 553 aaPredicted RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 FAM98BQ52LJ0 330 aaKnown RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 PRR30Q53SZ7 412 aaPredicted RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 WIPI1Q5MNZ9 446 aaPredicted RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 ZNF613Q6PF04 617 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 DEF8Q6ZN54 512 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 PLEKHM3Q6ZWE6 761 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 GDF7Q7Z4P5 450 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 FGD2Q7Z6J4 655 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 TMEM179BQ7Z7N9 219 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 YRDCQ86U90 279 aaKnown RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 NKAIN4Q8IVV8 208 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 GTPBP8Q8N3Z3 284 aaPredicted RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 TMCO5AQ8N6Q1 288 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 OR4K17Q8NGC6 315 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 OR4C15Q8NGM1 316 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 ST8SIA1Q92185 356 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 POP5Q969H6 163 aaKnown RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 PRRC1Q96M27 445 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 TRIM2Q9C040 744 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 NMNAT1Q9HAN9 279 aaPredicted RBP8.58□□□□□ -1.04
RFX3-201ENST00000302303 S100A14Q9HCY8 104 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 QPCTLQ9NXS2 382 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 AURKCQ9UQB9 309 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 AP4S1Q9Y587 144 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 MED12Q93074 2177 aa8.58□□□□□ -1.04
RFX3-201ENST00000302303 CACNA1BQ00975 2339 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 FREM3P0C091 2139 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 A0A087WUJ7 227 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 A0A087WZY1 265 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 A0A1B0GVC2 190 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 OR2M5A3KFT3 312 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 TRAPPC13A5PLN9 417 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 NPIPB7O75200 414 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 OR5F1O95221 314 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 HK1P19367 917 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 GDF1P27539 372 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 ADH6P28332 368 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 TACR3P29371 465 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 TDGF1P3P51864 188 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 IST1P53990 364 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 PPP1R8Q12972 351 aaKnown RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 GANABQ14697 944 aaKnown RBP8.57□□□□□ -1.04
RFX3-201ENST00000302303 SEC23BQ15437 767 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 INAQ16352 499 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 DCST1Q5T197 706 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 C1QL3Q5VWW1 255 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 WBP2NLQ6ICG8 309 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 TRILQ7L0X0 811 aa8.57□□□□□ -1.04
RFX3-201ENST00000302303 OFCC1Q8IZS5 231 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms