RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 FRS3O43559 492 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 CYP7B1O75881 506 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 OR5F1O95221 314 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 DRD5P21918 477 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 DCAF7P61962 342 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 ENTPD8Q5MY95 495 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 RPUSD3Q6P087 351 aaKnown RBP22.5■■□□□ 1.19
SSBP4-201ENST00000270061 PODNL1Q6PEZ8 512 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 GRAMD2AQ8IUY3 354 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 BEST3Q8N1M1 668 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 ZNF321PQ8N8H1 164 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 TOR1AIP2Q8NFQ8 470 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 HDAC2Q92769 488 aaKnown RBP22.5■■□□□ 1.19
SSBP4-201ENST00000270061 MCHR1Q99705 422 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 APOL4Q9BPW4 351 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 OR10H1Q9Y4A9 318 aa22.5■■□□□ 1.19
SSBP4-201ENST00000270061 SPTAN1Q13813 2472 aaKnown RBP22.49■■□□□ 1.19
SSBP4-201ENST00000270061 SPTBN1Q01082 2364 aaKnown RBP22.49■■□□□ 1.19
SSBP4-201ENST00000270061 NPIPA5A0A0B4J1W7 369 aa22.49■■□□□ 1.19
SSBP4-201ENST00000270061 NPIPA7E9PJI5 369 aa22.49■■□□□ 1.19
SSBP4-201ENST00000270061 FMO6PO60774 539 aa22.49■■□□□ 1.19
SSBP4-201ENST00000270061 NPIPA8P0DM63 369 aa22.49■■□□□ 1.19
SSBP4-201ENST00000270061 CYP4B1P13584 511 aa22.49■■□□□ 1.19
SSBP4-201ENST00000270061 RPP38P78345 283 aaKnown RBP22.49■■□□□ 1.19
SSBP4-201ENST00000270061 TRAM2Q15035 370 aa22.49■■□□□ 1.19
SSBP4-201ENST00000270061 RBM48Q5RL73 367 aaKnown RBP22.49■■□□□ 1.19
SSBP4-201ENST00000270061 SLC35B4Q969S0 331 aa22.49■■□□□ 1.19
SSBP4-201ENST00000270061 TUBA8Q9NY65 449 aaPredicted RBP22.49■■□□□ 1.19
SSBP4-201ENST00000270061 OR10H3O60404 316 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 CLPTM1O96005 669 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 EPHA2P29317 976 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 ATP12AP54707 1039 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 TUBA4AP68366 448 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 CD47Q08722 323 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 MRPL49Q13405 166 aaKnown RBP22.48■■□□□ 1.19
SSBP4-201ENST00000270061 RANBP3LQ86VV4 465 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-201ENST00000270061 FAM26EQ8N5C1 309 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 NFAM1Q8NET5 270 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-201ENST00000270061 GRHL3Q8TE85 626 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 SLC38A4Q969I6 547 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 ADIPOR1Q96A54 375 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-201ENST00000270061 FRG2CA6NGY1 282 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 TRIM64CA6NLI5 447 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 OR6C76A6NM76 312 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 ESRRGP62508 458 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 C6orf141Q5SZD1 244 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 PGBD2Q6P3X8 592 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 KLHL17Q6TDP4 642 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 FAM180AQ6UWF9 173 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 CD300LDQ6UXZ3 194 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 CMIPQ8IY22 773 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 B3GNT7Q8NFL0 401 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 ADAMTS16Q8TE57 1224 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 LCORQ96JN0 433 aaPredicted RBP22.48■■□□□ 1.19
SSBP4-201ENST00000270061 PRR14Q9BWN1 585 aa22.48■■□□□ 1.19
SSBP4-201ENST00000270061 CLEC18AA5D8T8 446 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 CPSF4LA6NMK7 179 aaKnown RBP22.47■■□□□ 1.19
SSBP4-201ENST00000270061 NUP107P57740 925 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 TOP3AQ13472 1001 aaPredicted RBP22.47■■□□□ 1.19
SSBP4-201ENST00000270061 DECR1Q16698 335 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 PDZK1Q5T2W1 519 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 CLEC18BQ6UXF7 455 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 PLEKHM3Q6ZWE6 761 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 RPS19BP1Q86WX3 136 aaKnown RBP22.47■■□□□ 1.19
SSBP4-201ENST00000270061 CLEC18CQ8NCF0 446 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 FAR1Q8WVX9 515 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 GTPBP3Q969Y2 492 aaKnown RBP22.47■■□□□ 1.19
SSBP4-201ENST00000270061 UCK2Q9BZX2 261 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 CDCP1Q9H5V8 836 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 COPS7AQ9UBW8 275 aa22.47■■□□□ 1.19
SSBP4-201ENST00000270061 USP9YO00507 2555 aaPredicted RBP22.46■■□□□ 1.19
SSBP4-201ENST00000270061 TFAP2AP05549 437 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 ELK4P28324 431 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 RPL5P46777 297 aaKnown RBP22.46■■□□□ 1.19
SSBP4-201ENST00000270061 RFX3P48380 749 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 GPR143P51810 404 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 UGT2B15P54855 530 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 COX10Q12887 443 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 FGFBP1Q14512 234 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 EBPQ15125 230 aaKnown RBP22.46■■□□□ 1.19
SSBP4-201ENST00000270061 INAQ16352 499 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 CTU2Q2VPK5 515 aaKnown RBP22.46■■□□□ 1.19
SSBP4-201ENST00000270061 C1orf94Q6P1W5 598 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 OR4K5Q8NGD3 323 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 UTP23Q9BRU9 249 aaKnown RBP22.46■■□□□ 1.19
SSBP4-201ENST00000270061 HOXD1Q9GZZ0 328 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 CTPS2Q9NRF8 586 aa22.46■■□□□ 1.19
SSBP4-201ENST00000270061 TESQ9UGI8 421 aaKnown RBP22.46■■□□□ 1.19
SSBP4-201ENST00000270061 MAN1A2O60476 641 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 IL33O95760 270 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 POU2F1P14859 743 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 LCN1P31025 176 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 GGT2P36268 569 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 HOXC5Q00444 222 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 PLAURQ03405 335 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 SRSF1Q07955 248 aaKnown RBP eCLIP22.45■■□□□ 1.195e-7■□□□□ 10.3
SSBP4-201ENST00000270061 CDK5R2Q13319 367 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 TUBA3CQ13748 450 aa22.45■■□□□ 1.19
SSBP4-201ENST00000270061 EIF2S3LQ2VIR3 472 aaKnown RBP22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms