RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 ReltQ8BX43 436 aa15.7■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Q8K039 155 aa15.7■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Unc50Q9CQ61 259 aa15.7■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cabin1G3X8Q1 2187 aaKnown RBP15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm13124A2A752 406 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Pcbd1P61458 104 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr733Q14AK5 308 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 CrxosQ3UL53 246 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Wdr20Q3UWE6 569 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 CalcrQ60755 533 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 GkQ64516 559 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Yod1Q8CB27 343 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Nrip1Q8CBD1 1161 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Arl5bQ9D4P0 179 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zbtb10E9Q8X5 861 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cntn1P12960 1020 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 G6pdxQ00612 515 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Kyat3Q71RI9 455 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rhbdd3Q8BP97 385 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Slc24a4Q8CGQ8 622 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cldn19Q9ET38 224 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Kcnip2Q9JJ69 270 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1234A2AVK5 314 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Mep1bQ61847 704 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 GnsQ8BFR4 544 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr854Q8VFF1 315 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Oasl1Q8VI94 511 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Siglec5Q920G3 569 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r124D3YTX4 307 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dsc1P55849 886 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1197Q7TR13 314 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gbgt1Q8VI38 347 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Scgb3a2Q920H1 91 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Q9D9C7 252 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tas2r119Q9JKT2 335 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cd300ld2A2A7W0 305 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr430E9Q5F1 317 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ccrl2O35457 360 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ldb2O55203 373 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Hrh2P97292 397 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dlk1Q09163 385 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Pdcd2lQ8C5N5 364 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Mpped1Q91ZG2 326 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Slc25a27Q9D6D0 322 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 1700034I23RikQ9D9Q3 184 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr319L7MTY4 306 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tra2bP62996 288 aaKnown RBP15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Foxred1Q3TQB2 487 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Commd3Q63829 195 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Hsh2dQ6VYH9 334 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1106Q7TR57 312 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zmpste24Q80W54 475 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rbm7Q9CQT2 265 aaKnown RBP15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Efcab11Q9D0E5 162 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm10608E9PZ13 166 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn2r9K7N6Z8 848 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Aff2O55112 1272 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 HccsP53702 272 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Znf185Q62394 352 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Shkbp1Q6P7W2 704 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cfap97Q6ZPR1 541 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zer1Q80ZJ6 779 aa15.69■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zfp26P10076 861 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Hes5P70120 167 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Klhl13Q80TF4 654 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Npsr1Q8BZP8 371 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 H2-Q4Q8HWB2 354 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr666Q8VH00 318 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rnf144aQ925F3 292 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 RgccQ9DBX1 137 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm364A2AFI6 671 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm8024L7N2E0 100 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Znf367Q0VDT2 340 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Aco2Q99KI0 780 aaKnown RBP15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Acot12Q9DBK0 556 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dcaf4A0A1Y7VNZ0 532 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tmem185aA2AF53 350 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Hacd4A2AKM2 232 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cd8aP01731 247 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Mmp7Q10738 264 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Eef2kmtQ3UZW7 335 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gpr107Q8BUV8 551 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr243E9PV96 316 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Kcng2F7A6P6 480 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr628K7N6B2 316 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Adamts10P58459 1104 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Hoxd13P70217 339 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 MocosQ14CH1 862 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cdk5rap1Q8BTW8 588 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Plcxd1Q8CHS4 345 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Serinc2Q8K0E7 450 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Fn3krpQ8K274 309 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr644Q8VH21 314 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr370E9Q848 314 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dyrk1aQ61214 763 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tmem106aQ8VC04 261 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Mtmr14Q8VEL2 648 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ears2Q9CXJ1 523 aa15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Myo5aQ99104 1853 aaKnown RBP15.68■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cep290Q6A078 2472 aa15.68■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms