RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PCDHGA6Q9Y5G7 932 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 NPFFR2Q9Y5X5 522 aa12.02□□□□□ -0.49
PHGDH-221ENST00000641573 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.49
PHGDH-221ENST00000641573 TLN1Q9Y490 2541 aaKnown RBP12.01□□□□□ -0.49
PHGDH-221ENST00000641573 A0A087WUU8 490 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 WWP2O00308 870 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 BCKDKO14874 412 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 RAD1O60671 282 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 PPM1BO75688 479 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 LYPD3O95274 346 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 NADKO95544 446 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-221ENST00000641573 ADAP00813 363 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 POU2F1P14859 743 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 OTX2P32243 289 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 CLK3P49761 638 aaKnown RBP12.01□□□□□ -0.49
PHGDH-221ENST00000641573 TPD52P55327 224 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-221ENST00000641573 MYBPC1Q00872 1141 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 NPRL3Q12980 569 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 DNASE1L3Q13609 305 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 CD226Q15762 336 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 EXT1Q16394 746 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 SWT1Q5T5J6 900 aaKnown RBP12.01□□□□□ -0.49
PHGDH-221ENST00000641573 ZNF613Q6PF04 617 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 KIRREL2Q6UWL6 708 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 APOOLQ6UXV4 268 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 ZNF730Q6ZMV8 503 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 NDUFAF7Q7L592 441 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 PPP1R32Q7Z5V6 425 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 NKAIN4Q8IVV8 208 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 ZNF440Q8IYI8 595 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 NLGN4XQ8N0W4 816 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 GATSQ8NAP1 163 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 TOR1AIP2Q8NFQ8 470 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 NLGN4YQ8NFZ3 816 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-221ENST00000641573 OR11G2Q8NGC1 345 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 M1APQ8TC57 530 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 PHOSPHO1Q8TCT1 267 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 ARSGQ96EG1 525 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 MUS81Q96NY9 551 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 UCK2Q9BZX2 261 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 GRIP2Q9C0E4 1043 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 ZBTB20Q9HC78 741 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-221ENST00000641573 PNPLA3Q9NST1 481 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 SLC7A7Q9UM01 511 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 CCDC88CQ9P219 2028 aa12.01□□□□□ -0.49
PHGDH-221ENST00000641573 NOTCH2Q04721 2471 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 A0A1W2PQ72 361 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 OR6C70A6NIJ9 312 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 H3BNH8 94 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 GTPBP1O00178 669 aaKnown RBP12□□□□□ -0.49
PHGDH-221ENST00000641573 OIP5O43482 229 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 ZNF354AO60765 605 aaPredicted RBP12□□□□□ -0.49
PHGDH-221ENST00000641573 ADAM11O75078 769 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 NTN1O95631 604 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 ITGB2P05107 769 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 NGFRP08138 427 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 CELA2AP08217 269 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 UBL4AP11441 157 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 DLSTP36957 453 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 IFNGR2P38484 337 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 STAT5AP42229 794 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 TLE1Q04724 770 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 CLN3Q13286 438 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 IL18R1Q13478 541 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 KEAP1Q14145 624 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 EFR3AQ14156 821 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 SSPNQ14714 243 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 ZNF691Q5VV52 312 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 PLAG1Q6DJT9 500 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 ZER1Q7Z7L7 766 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 APLFQ8IW19 511 aaPredicted RBP12□□□□□ -0.49
PHGDH-221ENST00000641573 C8orf59Q8N0T1 100 aaPredicted RBP12□□□□□ -0.49
PHGDH-221ENST00000641573 PARP8Q8N3A8 854 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 FAM71CQ8NEG0 241 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 ACOT11Q8WXI4 607 aaPredicted RBP12□□□□□ -0.49
PHGDH-221ENST00000641573 EXTL1Q92935 676 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 PRSS27Q9BQR3 290 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 MMP25Q9NPA2 562 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 GMPPBQ9Y5P6 360 aa12□□□□□ -0.49
PHGDH-221ENST00000641573 NSG1A0A0A6YYJ2 146 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 A0A0B4J2E0 115 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 A0A1B0GWA3 101 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 A0A1B0GX12 115 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 A0A1W2PQD3 144 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 CDRT15L2A8MXV6 281 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 C21orf140B9A014 251 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 ALG1L2C9J202 215 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 E9PQ18 207 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 ZNF264O43296 627 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 FADS1O60427 444 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 NAGAP17050 411 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 EPHA2P29317 976 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 RYKP34925 604 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 RPP38P78345 283 aaKnown RBP11.99□□□□□ -0.49
PHGDH-221ENST00000641573 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.49
PHGDH-221ENST00000641573 SKP2Q13309 424 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 LINC00303Q3SY05 128 aa11.99□□□□□ -0.49
PHGDH-221ENST00000641573 C4orf17Q53FE4 359 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms