RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 MCTS1Q9ULC4 181 aaKnown RBP16.35■□□□□ 0.21
HMGXB3-206ENST00000613459 IDUAP35475 653 aa16.35■□□□□ 0.21
HMGXB3-206ENST00000613459 PRLHRP49683 370 aa16.35■□□□□ 0.21
HMGXB3-206ENST00000613459 GPR176Q14439 515 aa16.35■□□□□ 0.21
HMGXB3-206ENST00000613459 TP53TG5Q9Y2B4 290 aa16.35■□□□□ 0.21
HMGXB3-206ENST00000613459 CD300LBA8K4G0 201 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 CYB5BO43169 146 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 HPGDSO60760 199 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 GCH1P30793 250 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 EMX1Q04741 257 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 MAP4K2Q12851 820 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 NEIL2Q969S2 332 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 MUL1Q969V5 352 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 PAAF1Q9BRP4 392 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 COQ3Q9NZJ6 369 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 ZNF443Q9Y2A4 671 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 OTOL1A6NHN0 477 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 CSNK1A1P48729 337 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 SNU13P55769 128 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 TRAPPC6BQ86SZ2 158 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 C12orf45Q8N5I9 185 aaPredicted RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 C3orf58Q8NDZ4 430 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 CASD1Q96PB1 797 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 RBM24Q9BX46 236 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 RDH16O75452 317 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 HMGN2P05204 90 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 CX3CR1P49238 355 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 SLC7A9P82251 487 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 IER5LQ5T953 404 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 MDGA1Q8NFP4 955 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 ZBTB8AQ96BR9 441 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 SFXN2Q96NB2 322 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 CSNK1G1Q9HCP0 422 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 TNFRSF1BP20333 461 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 ZNF679Q8IYX0 411 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 GPR26Q8NDV2 337 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 FRZBQ92765 325 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 NICN1Q9BSH3 213 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 SYT11Q9BT88 431 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 PAPOLGQ9BWT3 736 aaKnown RBP16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 NCDNQ9UBB6 729 aa16.34■□□□□ 0.21
HMGXB3-206ENST00000613459 ADAM23O75077 832 aa16.33■□□□□ 0.21
HMGXB3-206ENST00000613459 EDN1P05305 212 aa16.33■□□□□ 0.21
HMGXB3-206ENST00000613459 LANCL3Q6ZV70 420 aa16.33■□□□□ 0.21
HMGXB3-206ENST00000613459 SIMC1Q8NDZ2 872 aa16.33■□□□□ 0.21
HMGXB3-206ENST00000613459 SORCS2Q96PQ0 1159 aa16.33■□□□□ 0.21
HMGXB3-206ENST00000613459 HCAR1Q9BXC0 346 aa16.33■□□□□ 0.21
HMGXB3-206ENST00000613459 SDHAF2Q9NX18 166 aa16.33■□□□□ 0.21
HMGXB3-206ENST00000613459 LOC102723532A0A0G2JNH3 316 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 GABRR3A8MPY1 467 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 TOR1AO14656 332 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 TFAP2AP05549 437 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 TNFSF4P23510 183 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 TAS2R46P59540 309 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 BATFQ16520 125 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 AGAP7PQ5VUJ5 663 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 PGAP1Q75T13 922 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 UBTD2Q8WUN7 234 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 ARL5BQ96KC2 179 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 OR52D1Q9H346 318 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 PCDHGA6Q9Y5G7 932 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 A0A1W2PS29 197 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 ZNF142P52746 1687 aaPredicted RBP16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 EMP2P54851 167 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 ADARB1P78563 741 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 MPEG1Q2M385 716 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 LRP6O75581 1613 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 A0A0D9SG52 128 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 PTHP01270 115 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 CRHBPP24387 322 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 RAP2BP61225 183 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 LTB4RQ15722 352 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 LDLRAD1Q5T700 205 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 RFPL4BQ6ZWI9 263 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 IL17RDQ8NFM7 739 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 PAQR8Q8TEZ7 354 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 MSI2Q96DH6 328 aaKnown RBP16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 ATOH8Q96SQ7 321 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 CRB3Q9BUF7 120 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 GJD2Q9UKL4 321 aa16.33■□□□□ 0.2
HMGXB3-206ENST00000613459 ARAFP10398 606 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 FXYD4P59646 89 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 ZXDBP98169 803 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 FRMPD2BQ6IN97 320 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 OR6T1Q8NGN1 323 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 UHRF1Q96T88 793 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 MOKQ9UQ07 419 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 HEMK1Q9Y5R4 338 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 CSNK1G3Q9Y6M4 447 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 IGHEP01854 428 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 RAB4AP20338 218 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 NFYAP23511 347 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 AOAHP28039 575 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 ATP1B3P54709 279 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 FOXA1P55317 472 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 TGFBR3Q03167 851 aa16.32■□□□□ 0.2
HMGXB3-206ENST00000613459 HMGN3Q15651 99 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms